KEGG   Syntrophotalea acetylenica: A6070_00820
Entry
A6070_00820       CDS       T04585                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pace  Syntrophotalea acetylenica
Pathway
pace03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pace00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A6070_00820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pace03400]
    A6070_00820
DNA repair and recombination proteins [BR:pace03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A6070_00820
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A6070_00820
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran AAA_29 AAA_16 SMC_N AAA_21 AAA_25 AAA_23 nSTAND1 ATPase AAA_18 AAA_33 Viral_helicase1 nSTAND3 SLFN-g3_helicase AAA_14 DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: APG45249
UniProt: A0A1L3GJY7
LinkDB
Position
170085..172898
AA seq 937 aa
MSKTIIIKGACEHNLKGIDVTIPRDKLVVITGVSGSGKSTLAFDTLYAEGQRRYVESLSA
YARQFLEQMSKPDVESIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGRIH
CHGCGKEIASWTVQQMVDRIMTLPENTRLLLLAPIVRGRKGEYRKEMRQLQADGFVRIRI
DGEMRELGEDIVLDKNKKHTLEVVVDRLVMRPGIESRLADSLETALRLAGGIVRVEEVDG
ESRLFSEQHACADCGISYPEITPRMFSFNNPYGACPDCSGLGTRMYFDPEEVVPNPELSL
REGAVVPWETRTGFYYHQLLEALADHYGFDINTPFARLPERIRQILLYGSGKEQVRFFYD
QGERRHYFEKPFEGIIPNLERRYRESDSDRVRENLERFMNVMPCPTCQGARLRPESLFVR
VGGSNIQEVCALSIHEAERFFAELRLTDKEFEIARRILKEIRERLSFLTYVGLDYLSLDR
ASGTLSGGEGQRIRLATQVGSALVGVLYILDEPSIGLHQRDNRRLIDTLKRLRDLGNTVL
VVEHDEETILEADHVIDMGPGAGVHGGEIVSQGTPQEILDDPSSLTGRYLSGALTIPLPA
ERRRGERSLRIVGARENNLKGIDAAIPLGVMTCVTGVSGSGKSTLIIDTLFKALSQRLYR
SRDKAGRVDDIRGLEHLDKVIDIDQSPIGRTPRSNPATYSGVFTEIRDLFAQLPEAKLRG
YKPGRFSFNVKGGRCEACQGEGILKIEMHFLPDVYVQCEVCKGARYNRETLEVRYKGKNI
AEVLDMTVNQALVFMENIPRIRNKLEMLRDVGLGYIKLGQSATTLSGGEAQRVKLAKELG
KRGTGRTIYILDEPTTGLHFADIHKLLDVLHRLVDAGNTVVVIEHNLDVIKTADHIIDLG
PEGGSRGGEIVVCGTPEDVARCSASYTGRYLRPYLNL
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgagcaaaaccatcatcatcaaaggcgcctgcgagcataacctcaagggcatcgacgtc
accatccctcgggacaagctggtggtgatcaccggcgtgtccggatcgggcaagagcacc
ctggccttcgacacactgtatgccgagggccagcgacgctacgtggagagcctttcggcc
tatgcccggcagtttctcgaacagatgtccaagcccgacgttgaaagcatcgagggtttg
tctccggccatttccatcgagcagaaaaccacctccaaaaatccgcgttccaccgtcggc
accgttaccgagatctacgattacctgcggctgctgttcgcccgcgtcggccgtatccac
tgccacggttgcggcaaggagatcgcctcctggacggtgcagcagatggtcgaccgtatc
atgaccctgccggaaaatacccgactgctgctgctggctcctatcgtgcgtggccgcaag
ggcgaatatcgcaaggagatgcgtcagctgcaggccgacggtttcgtgcgcatccgtatc
gatggtgagatgcgggaactcggcgaggacatcgtcctggataaaaataaaaagcataca
ctggaggtggtggtcgaccgtctggtgatgcgtcccggcatcgaaagccgcctggccgat
tcgcttgaaaccgccctgcgcctggccggtggcattgtgcgggtggaggaggtcgacgga
gaaagccgcctgttttccgagcagcatgcctgcgccgattgcggcatctcctatccggaa
atcacgccgcgcatgttctccttcaacaatccctacggggcgtgcccggactgttcgggg
ctcggtacgcggatgtatttcgatcccgaggaggtggttcccaacccggagctttctctg
cgcgaaggcgccgtggtgccctgggagacccgcaccggtttttactaccatcagctgctg
gaagcactggccgaccattacgggttcgacatcaataccccttttgcccgcctgccggag
cgcatacgccagattctgctgtacggctcgggcaaggaacaggtgcgttttttttacgat
cagggcgagcggcgccactatttcgagaagcccttcgaggggattatccccaatctggag
cggcgctaccgtgaatccgactcggaccgcgtgcgggaaaacctcgaacgcttcatgaac
gtcatgccctgcccgacctgccagggtgcgcgtctgcgtccggaatccctgtttgtgcgg
gtcggcggcagcaacattcaggaagtctgcgccctctccatccatgaggctgagcgtttt
ttcgcggaactgcgcctgaccgacaaggaattcgagatcgcccgccggattctgaaggag
atccgtgagcggctgtcgtttctgacctatgtgggactcgactacctgagcctggaccgg
gcttcgggcaccctgtcgggcggcgaggggcaacgaatccgcctggccacccaggtcggc
tcggcgctggtcggggtgctgtatatcctcgacgaaccgtccatcggcctgcatcagagg
gacaaccgccgtctcatcgataccctcaagcggctgcgcgatctgggcaatacggtgctg
gtggtggagcacgatgaagagaccattctcgaagcggatcatgtcatcgacatggggccg
ggcgccggggtccacggcggcgagattgtctcccagggcacgccgcaggaaatcctcgac
gatccctcttcccttaccggccgctacctgtccggcgccctgaccattcccctgccggcg
gaacgccgccgcggcgaacgcagtctgcggattgtcggagcgcgggaaaacaacctcaaa
ggcatcgatgccgccatccccctgggggtgatgacctgcgtcaccggggtatcgggctcc
ggaaagtcgactttgatcatcgacaccctgttcaaggccctgtcccagcgactctaccgc
tcccgcgacaaggccggcagggtcgacgacatccgcgggctggagcatctcgacaaggtt
atcgacatcgaccagtcgcccatcggccgcacgccgcgttccaatccggcgacctacagt
ggcgtttttacagagattcgcgacctgtttgcccagttgccggaggccaaactgcgcggc
tacaagccggggcggttttccttcaacgtcaagggcggccgctgcgaagcctgtcagggc
gaggggatcctcaagatcgaaatgcatttcctgccggatgtctatgtgcagtgcgaggtc
tgcaagggcgcgcgctacaatcgcgagactctcgaagtgcgctacaagggcaagaacatt
gcggaagtgctcgacatgacagtcaaccaggccctggttttcatggaaaacattccccgc
atccgcaacaagctggaaatgctgcgcgatgtgggcctgggctacatcaagctggggcag
agtgccaccaccctttcggggggggaagcgcagcgggtcaagctggccaaggagctgggc
aagcgtggtaccggccgcaccatttacattcttgacgaaccgaccaccggcctgcatttt
gccgatatccacaaattgctggacgtgctgcaccggctggtcgatgccggcaatacggtg
gtcgtcatcgagcataacctcgacgtcatcaagaccgccgatcacatcatcgatctgggt
ccggaaggtggcagtcgcggtggcgagatcgtggtctgcggaacgccggaagacgtggcg
cgctgttccgcctcctataccgggcgctatctgcggccttacctcaacctgtaa

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