Syntrophotalea acetylenica: A6070_08065
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Entry
A6070_08065 CDS
T04585
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pace
Syntrophotalea acetylenica
Pathway
pace03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6070_08065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pace03400
]
A6070_08065
Enzymes [BR:
pace01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A6070_08065
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A6070_08065
DNA repair and recombination proteins [BR:
pace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A6070_08065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
APG45346
UniProt:
A0A1L3GJ87
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All DBs
Position
complement(1766148..1766963)
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AA seq
271 aa
AA seq
DB search
MPELPEVETIRRGISPWLLNRTVTQVIVRQDRLRWPVPPDLESCLIGRPFTAVMRRAKYL
LLKNAAGWLLIHLGMSGTLRILESTAGVTLHDHVDLLLDNRRCLRLNDPRRFGAVLWVDG
SPEEHPLLAHLGPEPFSEAFDGALLYARSRGRALAVKNFIMDQRIVVGVGNIYASEALFR
AGIHPARPAGRISRARYDALAVAVREVLSAAIEAGGTSLRDFTNEHGRPGYFSQQLLVYG
KKGQACVQCGAVIRCEVIGQRSSYFCPHCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttgcctgaagtcgaaaccatacggcgggggatcagtccctggctgctgaac
cggacggtaacccaggtcattgtgcgtcaggaccggctgcgctggccggtaccccccgac
ctggaaagctgcctgatcggccggccttttaccgccgttatgcgccgggccaagtatctg
ctgttgaaaaatgccgcaggctggctgttgattcacctgggcatgagcggtacattgcgt
atcctggagtcgacggcgggcgtgacgcttcacgatcatgtcgatctgctgctggataac
cggcgctgcctgcggttaaatgatccccggcgtttcggtgcggtattgtgggtcgatggc
agccccgaagagcacccgctgctggctcatctcggacccgaacctttttcggaggctttt
gacggagcgctgctgtatgcccgctcgcggggtcgcgcgctggccgtcaagaatttcatt
atggaccagcgcatcgtggttggcgtcggcaatatctacgccagcgaagcgctgtttcgt
gcaggcatccatcccgcccggccggccggccggatctcccgtgctcgctatgacgcgctg
gccgtggcggtgcgggaagtgctgtccgccgccatcgaggctggaggcaccagcttgcgc
gattttaccaacgagcacggccgaccggggtatttcagccagcaactgctggtttacggt
aaaaaaggacaggcgtgcgtgcaatgcggcgccgtcatacgttgtgaagtcatcggccag
cgcagcagttatttctgccctcattgtcagcgctga
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