Syntrophotalea acetylenica: A6070_08805
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Entry
A6070_08805 CDS
T04585
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pace
Syntrophotalea acetylenica
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pace03019
]
A6070_08805
Messenger RNA biogenesis [BR:
pace03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A6070_08805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Cas3_HD
tRNA_anti_2
DUF2332
Motif
Other DBs
NCBI-ProteinID:
APG45355
UniProt:
A0A1L3GJN6
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Position
complement(1923845..1924996)
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AA seq
383 aa
AA seq
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MKKVYAGQIRDRDIVQESFLVREKITAMARNGKPYLTIKLMDRTGEIEGRVWDRVEELSG
AFDKDDFVQVQGKASLYLGKMQLVVQDLKKLEDSQVDLGDYMPVATRSKADMLSELGAWI
ESLTTPCLKTLMERFLADESFMHGYASAPAAKAIHHVYLGGLLDHSLAVARLVDDICRHY
PSVNRDLLLTGALLHDIGKVAELCYERSFGYTDAGKLLGHIAIGFQMLDSKLAQVEDFPP
ETALLLKHLLLSHHGQYEYGSPKRPKTLEATILNYLDDLDSKINGIQAHIDKEPDSDESW
TGYHRIYDRYFYKTGSVAPLLLDEGGCPATAAPECGVPATDTATAETRRQPAERRRRGFN
CAIGDQLRGKNLDLFNLNERDDH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagtttatgcgggtcagatcagggaccgggatattgttcaggaatccttcctg
gtacgagaaaaaattaccgccatggcgcgcaacggcaagccctacctcaccatcaagctg
atggaccgcaccggggaaatcgaagggcgtgtctgggaccgcgtcgaggaactatcagga
gcttttgacaaggatgactttgtgcaggtgcagggtaaagccagtctgtacctcgggaaa
atgcagctggtcgtgcaggatctgaaaaagctcgaggattcacaggtcgatctgggcgat
tacatgccggtggccacgcggagcaaggccgacatgctgtcggaactcggtgcctggatc
gagagtctcaccaccccctgcctgaaaaccctgatggagcggttccttgccgacgagtcg
ttcatgcatggttacgccagtgccccggcggccaaggccattcatcatgtctatctgggc
ggattgctggatcactccctggcagtggcccgcctggtggatgacatctgtcgccactat
ccatccgtcaacagggatcttctgctgaccggcgctctgctgcacgatatcggcaaggtg
gccgagctctgttatgagaggagcttcggctataccgatgcaggcaagcttctggggcac
attgccatcgggtttcagatgctcgacagcaagctggcgcaggtcgaggatttcccgccg
gaaacggcgctgctactgaaacatctgctgctgtcccaccatgggcaatacgaatacggt
tccccgaaacgacccaagacactggaagccaccatcctcaactatcttgacgatctcgat
tccaagattaacggtatccaggcacatatcgataaagaaccggacagcgacgagtcctgg
accggctaccatcgcatctatgatcgctatttctacaagaccggttccgtcgcacccctg
ttgttagatgagggtggctgccccgccaccgcagcaccggagtgcggcgtccccgccacg
gacacggcaacggccgaaacgaggcggcagccggccgagcgccgccggagaggattcaat
tgcgccatcggggaccagttgcgcgggaaaaacctggatcttttcaatctgaacgagagg
gatgaccattga
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