Syntrophotalea acetylenica: A6070_08940
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Entry
A6070_08940 CDS
T04585
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
pace
Syntrophotalea acetylenica
Pathway
pace03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6070_08940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pace03019
]
A6070_08940
03009 Ribosome biogenesis [BR:
pace03009
]
A6070_08940
Enzymes [BR:
pace01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A6070_08940
Messenger RNA biogenesis [BR:
pace03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A6070_08940
Ribosome biogenesis [BR:
pace03009
]
Prokaryotic type
rRNA processing factors
A6070_08940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
APG44215
UniProt:
A0A1L3GCK3
LinkDB
All DBs
Position
1951320..1953791
Genome browser
AA seq
823 aa
AA seq
DB search
MTKKMLINATHPEEHRVAIVEDGVLTELDIEISGKEQTKGNIYKAVVTRVETGLQAAFVD
YGSERLGFLQIGEIHPSFFRGAEGRTEDGKRPRINDLLRRGQEILVQIVKEERGTKGAAL
TTFLSLPGRYMVLMPESDTKGISRKIEKESDRKKLREIMDSLEIPDNMGYIVRTAGSSQK
KADLKRDVDYLLRLYEKIQTLSGETKAPALIYKESNLVIRSIRDYFSDDMDEVLVDDARV
SAEARDFFREVMPEYAELVKLHQERRPIFARYQIEEQIDTITKNKVMLPSGGSIVIDTTE
ALVAIDVNSGKMASEQGVEATAYKSNLEAAVEVARQLRLRDLGGLVVIDFIDMRDRKHIR
EVEKTLKDAMKMDKARVTIGRISQFGLLEMSRQRIKSALAAASFEVCPHCNGSGKIKTVE
ARALAFLRRIHAGLAKGHIGRVDATLPLDVAGYLLNYKRSELLHIEQKNDVSVHIKACPD
YLNSQGEVEFHKREKDAIPSAAWIEASQVRAESTPDQEEFEAAPADEEPNAEDKPAKRKR
RPRRRRKPAGAEASRKEQGLEETPDNKPTDAVNLSPETQSAIVAADMATAETADTSTTEA
SSAAVAELREESADNQQTITKKPARSRSRRRKPAARKLAEATPEATPEATPEATPEATPE
ATPEAKPEAKPEAKPEAKPEAKPEAKPEAKPEAKPEAKPKRPRRVSTKTRHEAAPESGGT
VPQNSAETPDTLATSATQAAPEPAAATVATPKPKRSRRVALPAKSMIPKEAEPNPTAANG
TPAVATATAEEPPKKKPARRPRKPTVKKPAEPAAPDTNKDEPS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaaatgctcatcaacgccacccatcccgaagagcatagggtggccattgtc
gaagacggtgtcctgacagaactcgacatcgaaatttccggcaaggaacagaccaaaggc
aatatttacaaggccgtcgtcacccgtgttgaaaccgggctgcaggcggcctttgtcgat
tacggcagcgagcgccttggatttctccagattggggaaattcatccgtccttcttccgc
ggtgcggaaggtcgcaccgaagatggcaagcgaccgcgcatcaacgacctgctgcggcgc
gggcaggaaattctggtacagatcgtcaaggaggagcggggcaccaagggagccgcgctt
acgacttttctgtccctccccggacgttatatggtcctgatgcccgaatccgacaccaag
ggcatatcccgcaaaatcgaaaaggaatccgaccgcaaaaaactccgggaaataatggac
agcctcgaaatccccgacaacatgggttatatcgtgcgcaccgctggcagcagtcagaaa
aaagctgatctcaagcgcgatgtcgactacctgctgcggctttacgaaaagatccagacc
ctctccggggagacgaaagcaccggcgctcatctacaaggaatcgaacctggtgatccgc
tccatccgcgattatttcagcgacgatatggacgaggttctggtggacgacgcccgcgtc
tcagcggaagccagggatttcttccgggaggtgatgcccgaatatgccgaactggtcaag
cttcatcaggagcgccggcctattttcgcgcgttaccagatcgaggaacagatcgatacc
attaccaaaaacaaagtcatgcttccctccggcggttcgattgtcatcgacaccaccgag
gcgctggtagccatcgatgtcaactcggggaaaatggccagcgagcagggggtcgaggcc
acggcctacaaatccaatcttgaggccgcggttgaagttgcgcgccagttgcgcctgagg
gacctcggaggcctggtcgtcatcgacttcatcgacatgcgcgaccggaaacacatccgg
gaggtcgaaaagaccctcaaggatgccatgaaaatggataaggcccgggtaaccatcgga
cggatcagtcagttcggcctgcttgaaatgagtcggcagcgcatcaaatcggcgctggca
gccgcttcctttgaagtttgtccccattgcaacggcagcggcaaaatcaagactgtggaa
gctcgggcgctggcatttctgcgccggattcacgcgggactggccaaaggacatatcgga
cgggtcgacgcgaccctgccgctggatgtcgccggctatctgcttaactacaagcggtcg
gaactgctgcacatcgaacagaaaaacgatgtcagcgttcacatcaaggcgtgtccggac
tatctgaatagccagggagaggttgaattccataaacgcgaaaaagacgccatcccgtcc
gcggcctggatcgaagccagtcaggtccgggccgagagcacaccggaccaggaggaattt
gaggccgcccccgctgatgaggaaccgaatgcggaggacaaacccgccaagcgcaaacgc
cggccgcgccgccggcgcaaacctgccggagcggaagcttcacgcaaggagcagggtctg
gaagagacccccgacaacaaaccgacagatgccgtgaatttgagtccggagacacagtcc
gcgatcgttgctgccgatatggccaccgctgaaactgccgacacaagcaccaccgaagca
tcgtcagccgcggttgctgaattgcgggaggaatcggcggacaaccagcaaaccatcacg
aaaaaaccggcaagatcacgctcccgccgtcgcaaaccggccgccaggaagctggcggaa
gccacgccggaagccacgccggaagccacgccggaagccacgccggaagccacgccggaa
gccacgccggaagccaaaccggaagccaaaccggaagccaaaccggaagccaaaccggaa
gccaaaccggaagccaaaccggaagccaaaccggaagccaaaccggaagccaaaccgaaa
aggccccgacgcgtttcgacaaaaacccgccatgaggcagcaccggaatcaggcggcacg
gtaccgcaaaacagtgccgaaacacctgacactttggcgacttcggctacccaggcggca
ccggaacccgctgctgcgaccgtggcaacaccaaagcccaagcgttccaggcgtgttgcc
ctcccggcaaaatcgatgatcccgaaggaagctgaaccgaacccgactgcagccaacggg
actcccgctgttgccaccgccacggccgaagaaccgcccaagaaaaaaccggcccgtcgc
cctcgcaagccgacagtcaaaaaaccggcggaaccggcagcgcctgacaccaataaggac
gagccatcataa
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