Syntrophotalea acetylenica: A6070_11940
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Entry
A6070_11940 CDS
T04585
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pace
Syntrophotalea acetylenica
Pathway
pace03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6070_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pace03021
]
A6070_11940
03400 DNA repair and recombination proteins [BR:
pace03400
]
A6070_11940
Enzymes [BR:
pace01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6070_11940
Transcription machinery [BR:
pace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6070_11940
DNA repair and recombination proteins [BR:
pace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6070_11940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
APG44752
UniProt:
A0A1L3GDZ0
LinkDB
All DBs
Position
complement(2583256..2584272)
Genome browser
AA seq
338 aa
AA seq
DB search
MYKNWRDLIKPKRLQVDVDSLSDTYGKFTAEPFERGFGTTLGNSLRRVLLSSLQGAAITS
VRIKGVLHEFSSIPGVTEDVTDIILNLKGVLLKLHGTDSRNIRIVKKGAGVITAGDIITD
SHVDVLNPDHHILTCGKDADLEMDMVVAMGKGYVPAERNRDEKAPVGTIPIDALFSPIKK
VNFTVTNARVGQITDYDKLNLEISTDGSVRPDDAVAFAAKILKEQLQIFINFDEDTETVV
EEESEENRKINENLYRSVEELELSVRSANCLKNANIHLIGDLVQRSEAEMLKTQNFGRKS
LNEIKDILADMGLSLGMALENFPDPEYLKMIQEGKEDL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaactggagagatctgatcaagcctaagcgcctccaggttgatgtggactcc
ttgtcggatacctatggcaagttcacggctgagcctttcgagcggggattcggcaccacc
ttgggtaattccctgcggcgggtgctgctctcgtctctgcagggtgcggctatcacctcg
gtcaggataaaaggggtactgcatgaattttccagcatcccgggtgttaccgaagatgtc
acagatatcatcctgaatcttaaaggggtgctgctcaagctgcacggtacggacagtcgc
aacatccggattgtcaaaaagggcgctggcgtcatcacggcaggtgacattatcacggat
tcccatgtggatgtactcaatcccgaccatcatatactgacttgcggcaaggatgccgat
cttgaaatggatatggtcgtcgccatgggcaagggctacgtgccggctgaacggaaccgg
gatgagaaggctccggtgggaacgatccccatcgatgcgcttttttcgccgattaaaaag
gtcaatttcacggttaccaacgcccgtgtcggacaaatcaccgactacgacaagcttaac
ctcgaaatctccacggacggaagcgtgcgtcctgatgacgcggtggctttcgctgctaaa
attctcaaggaacagttgcagattttcatcaacttcgatgaagatacggaaacggttgtc
gaagaggagagtgaagagaaccgcaagatcaacgaaaatctgtatcgctccgttgaggaa
ctggaactttccgtgagaagtgccaactgcctgaagaatgccaatattcaccttatcggc
gacttggtgcagcggtccgaagctgagatgctcaaaacccagaacttcgggcgaaaatct
ttgaacgaaattaaggatatactggccgatatggggctttcactcggtatggctctcgag
aattttcccgatcctgaatatcttaaaatgattcaggaagggaaagaagatctatga
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