Syntrophotalea acetylenica: A6070_12730
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Entry
A6070_12730 CDS
T04585
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pace
Syntrophotalea acetylenica
Pathway
pace03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6070_12730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pace03400
]
A6070_12730
DNA repair and recombination proteins [BR:
pace03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A6070_12730
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A6070_12730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
APG44889
LinkDB
All DBs
Position
complement(2740476..2741288)
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AA seq
270 aa
AA seq
DB search
MWPVVVLEVRWRMETCCSDAVVLHHLDYGEADRIVTFFSLDQGLVKGFARQARKSRKRFG
AALEPFSSVRIRWQAPRGGELVSVQEAELVDLRNGLRHDLLALALAAYGCELVENLMGES
GPQSGVYHLLIAFLDHVTRHGGSDEARLLFELRLLSLAGYEPRLLQCCKCGVPLRSETVA
FAAASGGGLCPDCAGQGDVQLLSPLTLGSLARALQSPPTLFEGFRFGAQTLQEGGRAIFS
MLRQHLSRPVKSLAFLTQMAEGRSRVAAIR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgtggccggtggttgttctggaggtacgctggcgtatggaaacctgttgttcggatgcc
gtggtgctgcatcacctggactatggtgaggcggaccgcattgtgacgtttttcagcctc
gatcagggtcttgtaaagggttttgcacggcaggcgcgcaagagccggaaacgttttggc
gcggcgctggagccgttttcgtccgtccgtatccgctggcaggcgccgcgcggcggggag
ctggtttccgtgcaggaggcggaactcgtcgatctgcgcaacggtctgcggcacgatctg
ctggccctggccctggccgcctacggctgcgaactggtcgaaaacctgatgggtgaatcc
ggcccccagtccggcgtctaccatctgctgatcgcttttcttgaccacgttacccgccat
gggggttcggacgaagcccgcttgctgttcgaactgcgtctgctgagccttgccggttac
gagcctcgtcttctgcagtgctgcaagtgcggcgtgccgctgcgctccgaaacggtggct
tttgccgccgcgtccggcggggggctgtgtccggactgcgccggccagggagatgttcag
ctgctctcgccgttgactctgggcagtctggcgcgcgccctgcagtcgcccccgaccctg
ttcgaagggttccgtttcggggcgcagacccttcaggagggcggacgggctattttctcg
atgcttcggcagcatctcagccgccccgtcaaatcgctggcgtttctcacgcaaatggcc
gagggtcgctcccgggtcgctgccattcgttaa
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