Syntrophotalea acetylenica: A6070_13160
Help
Entry
A6070_13160 CDS
T04585
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
pace
Syntrophotalea acetylenica
Pathway
pace02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A6070_13160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pace03021
]
A6070_13160
Transcription machinery [BR:
pace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A6070_13160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
RPW8
APC_rep
COG3_N
Laminin_I
NagJ_C
Motif
Other DBs
NCBI-ProteinID:
APG44962
UniProt:
A0A1L3GEL9
LinkDB
All DBs
Position
complement(2823530..2825293)
Genome browser
AA seq
587 aa
AA seq
DB search
MAKKHGMEEVQQLIDMGKEKGYLTYDEVNDYLPESVVSSDQLDDVMSLFGEMDIEVVDSE
QKVSLPQTQGEGDEEGGESGEEEETEYEAGTLGRTSDPVRMYLREMGQVSLLTREGEVEI
AKRIEEGEALVARVIMKTPIAFREVIRLGEKLAREQIGVAEITKEYEEEEGADAEGVQRE
RILGLVEKIRQHNEQLMELRQRLADCGDRQQRNALRTQIGDIKLVISELMREIRLKDFQV
DKIVDRLKEMAQQVKKGLSEVQACEDELKQPHKEIKRLLRRMRKSDEEAHRISQELNVPV
DTLLSVEKRLKGAQRKFNRVEEESGFAPEELLESLKEVQKGEWRAKAAKSELVEANLRLV
VSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQA
RTIRIPVHMIETINKLIRTSRQLVQEMGREPVPEEIAERMELPLEKVRRVLKIAKEPISL
ETPIGEEEDSSLGDFIEDKGVVSPLEAVIKSNLSDQTARVLASLTPREEKVLRMRFGIGE
KSDHTLEEVGQDFAVTRERIRQIEAKALRKLRHPSRAKRLKSFVETT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagcatggcatggaagaagtgcagcagcttatcgatatgggcaaggaaaaa
ggttaccttacctatgatgaggtgaacgattatcttccggaaagcgttgtttcttccgac
cagctggacgatgtcatgagcctgttcggggaaatggacatcgaggtggtcgattcggag
caaaaggtgtctctgccccagacccagggggaaggtgatgaagaaggcggcgaatccgga
gaggaagaggaaaccgaatacgaagccgggaccctgggacggaccagcgatccggtgcgc
atgtatctgcgcgagatgggacaggtttccctgttgacccgtgagggcgaagtcgagatt
gccaagcgcatcgaggaaggtgaggcgctggttgccagggtgatcatgaagacgcccatc
gcctttcgcgaagtgatccgcctgggtgaaaaactcgccagggaacagattggcgtggcc
gagatcaccaaggagtacgaagaggaagagggcgccgatgccgaaggggtgcagcgggag
cgcattctggggctggtggaaaagatccgtcagcataacgagcagctcatggagctgcgc
cagcggctggctgactgtggggaccgtcagcaacgcaacgcactgcgtacccagatcgga
gatatcaagctcgtcatcagcgagttgatgcgtgaaatccgcctgaaggactttcaggtt
gacaagattgtcgaccgactcaaggagatggcgcagcaggtcaagaaaggactttccgag
gtgcaggcctgcgaggatgagcttaagcagcctcacaaggaaatcaagcggttgctgcgg
cgcatgcgcaaaagcgacgaggaagcgcaccgcatctcgcaggagctgaatgtccccgtc
gataccctgctttcggtggaaaagcgtctcaagggcgcgcagcgcaagttcaaccgtgtc
gaggaggaatcaggtttcgcaccggaggagctgctggagtccctcaaggaagtgcagaag
ggcgagtggcgcgccaaggcggccaagagcgaactggtcgaggccaacttgcggctggtg
gtttccatcgccaagaaatacaccaatcgcggcttgcagtttctggatctgattcaggaa
ggcaacatcggcctgatgaaagccgtcgacaagttcgaatatcagcgcggttacaaattt
tccacctatgcgacctggtggatcaggcaggccattacccgcgccattgccgatcaggcg
cgcaccatccgcatcccggtgcatatgattgaaaccatcaacaaactgatccgtaccagc
cgtcaactggtgcaggagatggggcgtgaaccggtgcccgaggaaattgccgagcgcatg
gaattgccgctggaaaaggtgcggcgggttctcaagatcgccaaggagccgatcagcctc
gaaacgcccatcggtgaggaagaggattcttccctgggggattttatcgaggacaagggc
gtggtgtcgccgctggaggcggtcatcaagagcaacctgtcggatcagacggcgcgggtg
ctggcatcgctgacaccgcgggaagagaaggttctgcgcatgcgcttcggtatcggcgaa
aaatccgatcataccctggaagaggtcgggcaggacttcgccgttacccgtgaacgcatt
cgccagatcgaggccaaggcgctgcgcaaactgcgtcaccccagccgcgccaagcggctg
aagagtttcgtggaaaccacttga
DBGET
integrated database retrieval system