Cutibacterium acnes HL096PA1: PAGK_0490
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Entry
PAGK_0490 CDS
T02638
Name
(GenBank) superfamily II DNA/RNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAGK_0490
09124 Replication and repair
03420 Nucleotide excision repair
PAGK_0490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pach03021
]
PAGK_0490
03400 DNA repair and recombination proteins [BR:
pach03400
]
PAGK_0490
Enzymes [BR:
pach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAGK_0490
Transcription machinery [BR:
pach03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PAGK_0490
DNA repair and recombination proteins [BR:
pach03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PAGK_0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
Helicase_C
ResIII
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AGJ79345
LinkDB
All DBs
Position
complement(538730..540814)
Genome browser
AA seq
694 aa
AA seq
DB search
MLPHPPFAGRRPRIHDSAHAHGHTHKLRQYALNNQSPDRLLSTQPVHAHCGDLPAAREGF
LRCHHGPSAARPSHLGTRLTWSCWFPRLAVAMRLASVPSAICGGNRILAAHHCHNRPRAA
TPTHSTRTSPGTNARCGAILGVMTSVPGPLIVQSDHTLLLEVDHPQADECRHAIAPFAEL
ERAPEHIHTYRLTPLGLWNAMAAGHDAEQVVDILMRYSRYPVASGLLIDVTETMSRYGRL
RIEKHPTHGLVLVSTERAILTEVLRSKSVRGLVGNQIDDETAVVHPSQRGTLKQALLKLG
WPAEDLAGYVDGEHHDIDLDEDGWSLRPYQKVAAQSFWDGGSGVVVLPCGAGKTVVGATA
MSLARCTTLILVTNTVSARQWKEELVRRTSLAPDDIGEYSGSRKQVRPVTIATYQVITTK
RHGVHPHLELFEARDWGLVIYDEVHLLPAPVFRMTADLQARRRLGLTATLVREDGHEDDV
FTLIGPKRYDAPWKEIEAQGWIAPADCVEVRVSLSESDRMACAMAEPDVRYRMAATLPIK
NKVVRDLVERHRGQPTLVIGQYVDQLEELAAELKCPIITGSTTPTRRQEIYQDFREGQID
LLVVSKVANFSIDLPSAEVAIQVSGAFGSRQEEAQRLGRLLRPKEGLVARFYAVVSRDTV
DTDFASHRQRFLAEQGYSYRIIDADDLDALDRTA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgcatccacctttcgcgggtcgacgtccacgtattcatgatagtgcgcatgcc
cacggccatacccacaagctcagacagtatgcgctcaacaaccaatcacccgaccggcta
ctgagcacacaacccgtccacgcacactgcggcgatctccctgcggcgcgagagggcttt
ctgcgctgtcatcatggccccagcgcagccagaccatcgcatctcggaacgcggctgacg
tggagctgctggttcccccgcctagctgtggctatgcggctcgcaagcgttccctctgcc
atctgcggtggcaacaggatcctcgccgcgcatcattgccacaaccgcccgcgggctgcg
acaccgacgcactcaacccgaacctcgccgggaacaaacgcacgctgtggggcgatactt
ggagtgatgacttctgtacccggcccactcattgtccagtccgaccacactctcctgctg
gaggtagaccacccccaggcagacgagtgtcgccacgctatagccccattcgcggaacta
gaacgcgcccctgaacacatccacacctaccggctcaccccgctgggactgtggaatgcc
atggctgccggccacgacgcagagcaagtcgtcgacatcctcatgaggtattcgcgctac
ccggtagcctccggcctgctcatcgatgtcaccgagacgatgtcaaggtatggcaggttg
cgcattgagaagcaccccacccatgggctggtattggtgtcgactgaacgagccatactc
accgaggtgttgcgttccaagtcagtgcgcggtcttgtcggtaatcaaatcgatgatgag
acggctgtggtccatccttcgcagcgcggcaccctcaaacaggcgctgctcaagctgggg
tggccggctgaagacctcgccggttacgtcgacggcgagcaccacgacatcgaccttgac
gaggatggttggagcctgcgcccctaccagaaagtagcggcgcagtctttctgggacggc
ggatctggagtcgttgtactgccctgcggcgctggcaaaacggtcgtcggggccaccgct
atgagcctcgcccgctgcaccactctgatcctcgttaccaacaccgtttcagcacggcag
tggaaagaggaactcgttcgtcgcacctccctcgcccccgacgacatcggtgaatactcc
gggtcgcgcaaacaagtgcgcccggtaacaatcgccacctatcaggtcatcaccaccaaa
cgtcacggagtgcacccacacctagaactcttcgaagcccgcgactggggcctagtgata
tatgacgaggtacacctgctgccggccccggtcttccgaatgacggctgacctgcaagcg
cgtcgtcgtctcggcctgacagccaccctagtgcgtgaggacggacacgaggacgatgtc
ttcaccctcatcggcccgaaacgctacgacgctccgtggaaggaaatcgaagcccaagga
tggatcgcacctgctgattgcgtcgaggtgcgggtgagcttgtcggagtctgaccggatg
gcctgcgcgatggccgagcctgacgtccgctaccggatggccgcaaccctccccattaaa
aacaaggtcgtgagagacctggtcgagcgtcatcgtggacagcccacccttgtcatcggc
caatacgttgaccagttggaggagctggccgcggaattgaagtgcccgattatcaccggt
tcaacgacgccgactcgccgtcaggagatctaccaggacttccgggaggggcagatcgac
ctgctcgtagtctctaaggtcgccaacttctccattgacctaccaagcgcggaggtcgcc
atccaggtctcgggagcatttggatcgcgtcaagaagaggcccagcgtttgggccgtcta
ctgcgtcccaaagagggcctggtggcccgtttctatgcggtcgtctcgcgcgataccgtt
gatacagactttgccagccatcgtcagcgattcctggccgagcagggatactcgtaccgc
atcattgatgcagacgatctggacgcattggaccgaacggcgtga
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