Cutibacterium acnes HL096PA1: PAGK_0577
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Entry
PAGK_0577 CDS
T02638
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PAGK_0577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pach03019
]
PAGK_0577
03009 Ribosome biogenesis [BR:
pach03009
]
PAGK_0577
Messenger RNA biogenesis [BR:
pach03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PAGK_0577
Ribosome biogenesis [BR:
pach03009
]
Eukaryotic type
Pre-60S particles
RNases
PAGK_0577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGJ79431
LinkDB
All DBs
Position
complement(634969..635586)
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AA seq
205 aa
AA seq
DB search
MKDMLVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVR
NMHTTSGLLAELDKGLTMAQAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLAKDMPKL
ASYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWREVLMVPS
PGPETTRCDEIAAKYQGFLTGAGRD
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacatgctggtgtggatcgattgcgagatgaccgggctcgacctggcccacgac
gggctcatcgaggtggccgcactggtcaccgatggacagctcaacgttcaaggtgagggg
gtggacgtcatcatcaagcccgagccccagtggctcgatcacatgaatgatttcgtgcgc
aacatgcacaccacatccggccttcttgcggagctcgacaagggactgacgatggcgcag
gcccaggatcaggtgctcgactacatccgtacctacgtcccacaggctggtaaggcgccg
ttagctggcaacaccataggcaccgaccgctccttcctggccaaggacatgcctaaactc
gcgtcctacgtgcactaccgcaacgtcgacgtctcctccatcaaggaactggcacgacgc
tggtacccgcgcgcattcggacactccccggagaagcagggcaaccaccgagcgctcgct
gacatccaggagtccattgaggagctcatgtactggcgcgaggtccttatggttccttcc
cctgggccggaaaccacgcgttgtgatgagatcgcggccaagtatcagggcttcctcacc
ggggctgggagagactga
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