Cutibacterium acnes HL096PA1: PAGK_0863
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Entry
PAGK_0863 CDS
T02638
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03420
Nucleotide excision repair
pach03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAGK_0863
03430 Mismatch repair
PAGK_0863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pach03400
]
PAGK_0863
Enzymes [BR:
pach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAGK_0863
DNA repair and recombination proteins [BR:
pach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAGK_0863
MMR (mismatch excision repair)
Other MMR factors
PAGK_0863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
4_1_CTD
Motif
Other DBs
NCBI-ProteinID:
AGJ79708
LinkDB
All DBs
Position
965848..969066
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AA seq
1072 aa
AA seq
DB search
MTSLIGNAPVDGVDVAALLGIPISAEQERAVQAPLKPCAVIAGAGTGKTTVMAARVVWLV
ASRLVSPEEILGLTFTNKATAELSERIESNLTRVGLLTSEQPRPTVATYDSFAGTLVNDY
GAWDGISTGAHLITGARAYQLAAEVVMGLDKAPLAATHMGPTFIAQAVVKLAGAMASHDA
SPGKVRRADARWRQMLLAAPTKRGGDRYADIDKWLSRVDEREELLDLVAAYQNLKKERGL
VEFGDRMVQALHLVTHHPRVGEELRARYRVVLLDEYQDTSSAQADVLAALFSGPDSAHGM
GHPVMAVGDPLQAIYEWRGAAASNILEFHRRFPNKEGTPAQVLSLATNRRCADQIINAAN
VASEELRQTLSSAVESGDHDPADDRAEVAVGQPLVAPEGNRRGEVTVAAYPDWVKECQAC
ADILVEAKERGTIARWSDAAILVRRNSDVADLYDSLTARDVPVRFANLSGLLRLPDIAMV
VAHLRVLVDRQDDAAMATLLAAPRLGLSTDDLAMVYRRARALAKARAKDDGLDLDDVEIH
LSDAVMEGRPGGHERLQCALKRVCAEIVEVDAHRADSPDDLVLRIEAITGLVDDMAADDP
HRSAARRDHLDALWNAIREARRSDPTMTIAGIVTWLAAEEDVGDGLPRAATDDRDAVTVS
TVHGAKGLEWPLVIIPDMAQGVFPSTSTPDNFTSEAAVLPSFARGDASDISHPLSGSVVD
TKAYVAALKEDSQWAEARLAYVALTRAKERLVVSWHQWRPRRKGSLGPGRYADLLADMLG
TVWPDFGERPDDDIQAGTPWPVFAKDVGHGLIDNTSRSVDDPGQADRVKAWRTDADTLLK
DARRHIDLQDEVALPPRLTTSQIVRLHANPQAFRDDLRRPMPRPADRGAGIGTAFHEWVS
QRLAPAEPIPLFDAEEIAELDEESITQEAVAVEPSGAENRALRSLCQAFEESRWAGATVL
AVEKSFVMTIGQTVVRGRLDAVVADPDHPGDELVIDWKTSPPRSADPLQLSIYRLAWAQA
RGIDPSRVRAVFHHVGANETISAEPLLDADQVAAILTASSSGNRPTKNASDA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcttgattggtaacgccccggttgatggcgtcgacgtggcagcgctgctaggc
atccccatttccgccgagcaggagcgagcagttcaggcgccactcaaaccctgtgcggtg
atagctggagcaggcacgggtaagacgacggtgatggccgctcgcgtggtgtggttggtt
gccagcagactggtaagcccggaggaaatcctcgggttgacatttaccaacaaggcgact
gcggaattatccgagcgcattgaatccaacctcactcgggtgggcctgttgacgtcagag
cagccccgtccgacagtggcgacctatgacagttttgcggggacactggtaaacgattac
ggagcctgggacggtattagcacgggggcacatctcataactggtgccagggcttaccag
ctcgcggcggaggtcgtcatgggacttgacaaggctccgctggccgctacccatatgggg
ccaacgttcatagcccaagctgtagtgaaactggctggagccatggcctcacacgatgcg
agtccgggcaaggtcaggagagctgatgcccggtggcgccagatgctccttgccgctccg
acaaaaaggggaggggatagatacgctgatatcgataaatggctctcgcgagtcgatgaa
cgcgaagaactccttgatcttgttgccgcctatcagaatctcaagaaagaacgcggattg
gtcgagtttggcgaccgtatggttcaagccctccacctagtaactcatcacccgcgagtg
ggggaggaactgagagccagataccgtgttgttctcctcgacgagtatcaagatacatcg
tcggcccaggctgatgtgcttgctgccctattttcgggtccggactcagctcatggcatg
ggccacccagtgatggctgtcggcgatccgcttcaggccatttacgaatggcgtggcgcg
gccgccagtaacatcttagaatttcaccggcgctttccgaataaggaagggacgccagcc
caggtgctctctctcgcaaccaaccgcagatgcgccgatcagattatcaatgcggcgaac
gtagcgtcagaagagttgcgacaaacgctgtcgtcagcggtggagtctggcgatcatgac
cctgctgacgatcgggctgaggtggcagttgggcagccgcttgtcgcgcccgaggggaat
cgacgtggcgaggtcacggtggccgcatatcctgactgggttaaggaatgtcaggcgtgc
gccgatatcttggtggaagccaaggaacgtggcaccatcgcacgctggtctgatgccgca
atccttgttcgacgtaattcagacgtggccgacctctacgactcccttactgctcgtgat
gtcccggtgcgatttgcgaacttgtctggattgcttcgactcccggacattgccatggtg
gtcgctcatcttcgggtgttggtggatcgtcaggatgatgcggcgatggcgactctactt
gccgcaccacgtcttggactcagtacggatgatctggcgatggtgtatcggcgcgcccgc
gctctggcgaaagctcgggccaaggacgatgggctagacctcgatgatgtcgagatccac
ctctctgacgctgtgatggaaggacgacccggtggtcatgaacgactgcagtgtgccctg
aaacgggtatgtgccgagatcgtcgaggttgacgcgcaccgggcggatagccccgatgac
ttggttctgcgcattgaggccattacaggactcgtcgacgatatggctgctgacgacccg
caccggagtgcagcacggcgagatcacctggatgcgctgtggaatgcgatacgtgaggct
cgtcgcagcgatcccactatgacgatcgcaggaatcgtcacttggttggcggctgaagaa
gatgttggcgacgggcttccccgagccgctaccgacgatcgcgacgctgtaacggtgtcg
acagttcatggagccaaaggcctggaatggccgttagtcatcatccccgacatggctcaa
ggtgtatttccgtcaacgtcgactccagacaacttcacctcggaggctgctgtcctgcct
tccttcgctagaggagatgccagcgacattagccatccactatcgggaagtgtcgtcgat
actaaagcgtacgtagcggcgctcaaggaggattcacagtgggcggaggctcgactcgcc
tatgtggcccttacccgtgccaaagaacgattggtggtgtcgtggcatcaatggcgccca
cgccgcaagggtagtttagggccaggtcgatatgcagaccttctcgccgacatgcttgga
acggtgtggccggactttggtgagcgtcctgacgacgatatccaggctggcacgccctgg
cctgtgttcgctaaggatgtgggtcacggcctcatcgacaacacatcccggtccgttgat
gatcctggacaggctgatcgggtgaaggcgtggcggactgacgctgatactctgctcaaa
gatgcgagacgacacatcgatctgcaggatgaggtggcgcttccaccgcgcctgactacc
tcgcagatcgtgaggctccacgccaatccgcaggcgttccgggacgatttgcgccgccca
atgcctcgaccagctgacagaggagctggaattggtacagcattccatgagtgggtgagc
caacggctcgcgcctgcagaaccgatcccgctgtttgatgccgaggaaattgcggagctt
gacgaggagagcattacacaggaggctgtcgcagttgagcctagtggtgccgagaaccgt
gcgctgcggagcctttgccaagcctttgaagagagtcgctgggcgggcgccactgtactg
gcagtagagaaatcctttgttatgacgatcggtcagacggtcgtgcgtggtcgtcttgac
gccgttgtcgctgatccggatcaccccggagatgagctcgtcattgattggaagacctca
ccaccacgctcagcagacccgctccagctatccatctaccggttggcgtgggcgcaggcg
agggggattgatccgtcgagggtgcgggcggtgttccatcatgttggcgcaaatgagact
attagcgccgaacctctcttagatgcggaccaggtagcagctattttgacggcatcgtct
tccgggaacaggccgacgaagaatgcgtctgacgcgtga
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