Cutibacterium acnes HL096PA1: PAGK_0868
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Entry
PAGK_0868 CDS
T02638
Name
(GenBank) putative DNA helicase II-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03420
Nucleotide excision repair
pach03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAGK_0868
03430 Mismatch repair
PAGK_0868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pach03400
]
PAGK_0868
Enzymes [BR:
pach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAGK_0868
DNA repair and recombination proteins [BR:
pach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAGK_0868
MMR (mismatch excision repair)
Other MMR factors
PAGK_0868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
HHH
DUF3263
Motif
Other DBs
NCBI-ProteinID:
AGJ79713
LinkDB
All DBs
Position
978422..980542
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AA seq
706 aa
AA seq
DB search
MLLSVTTLMVIAVRTRTADAILAALDPEQVKVAKTFDVPVCVIAGAGTGKTRAVTHRIAY
GAATGKLDPRRTLAVTFTTKAAGTMRGRLADLGVVGVQARTIHSAALRQIKFFWPRAYNC
ELPPVSDSRFSMVAEATHRIGLGNDKALLRDLSAEISWAKVSNVPTDQYASLARAEGRVV
AGVSATDVGRVLAGYEAVKRERCVIDLDDILLCAVGLLVQHRDITEEIRARYRHFVVDEY
QDVSPLQHRLLELWFGDRNDVCVVGDPHQAIHSYAGARADYLLNFVADHPGAKRIDLVRN
YRSTPEIVQLANEVLVNRMTPEEALEHGRGVTLVSRGRSGPEPIYQALGDDASEASAVAM
WIESRHAAGIPWSEIAILYRINSQAAQLETALAERSIPYLVKGSERFYDRGEVRRSLDAL
ARLAADEPGADPLRAFDRILAAQGWSAIAPEGEGDVRQRWESLQALHDLTVSVVDDGTRT
LEQLAAVFSRRAATQEAPVGDGVTLATLHASKGLEWDVVALYGINDTMVPFIMAEAPAEM
ASERRLLHVGVTRARRDLWVSYSWSGGNRDRQGISRFLRGLPGTGEMTDKPPRHRRKRRA
TITVCSVCGKALTAARDRKLGHHLACEVGVDPALVERLRQWRSERAEADRVPAFVILTDA
TLLGVAEKRPDSMEGLLQIPGVGRRKADLYAADLIKVLHGSSDNQQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtcggtcacgacccttatggtgatcgctgtgagaacccgaacggcagatgcg
attctggcggcactggatcctgagcaggtcaaggttgcgaagaccttcgatgttccagtg
tgcgtcatagctggtgccgggacaggtaaaactcgtgctgtcactcatcgcattgcctac
ggcgcagcgacaggcaagcttgatccgcgtcgtaccctcgcggtcacttttacgactaag
gcagctggcacgatgagaggtcgactcgctgatcttggggttgttggtgtgcaggctcgc
actattcattctgcggcgttgcggcagatcaagtttttctggcctcgtgcatataactgt
gagttgccaccggtgagtgattctcgtttctcgatggtggcagaggcgacccatcgcatt
ggtctgggcaatgacaaggcgctgctgcgcgacttgtccgccgagatctcgtgggcgaag
gtctcaaatgtgccgactgatcaatacgcatccctggctagggcggaaggtcgggtggtg
gcgggagtttcggcaactgacgtaggacgcgtcctcgctggatatgaggctgtgaagagg
gaacgctgcgtcattgatctggacgatattttgttgtgcgcggtgggattgctggttcag
caccgtgacatcactgaggagattcgggctcggtaccgacatttcgttgtcgacgaatac
caggacgtttctccgctgcagcataggttgcttgaactgtggtttggcgatcgaaatgat
gtatgcgtcgtgggagatccgcaccaggccattcactcttatgcaggcgcgcgagctgac
tacctcctcaacttcgttgccgatcatcctggcgctaaacgcatcgatttggttcgcaac
taccgctccacccccgagatcgttcagttggccaatgaagttcttgtcaaccgtatgact
ccagaggaggctctggaacatggcaggggagtcacactggtttcgcggggacgatccggt
cccgagcccatctatcaggctctcggggacgatgcctccgaagcttcagctgtagcaatg
tggattgaatcgcgccatgctgcgggaatcccatggtctgagattgccatcttgtaccgg
attaattctcaggcagcccagcttgagaccgcgctggccgaaaggtccatcccatatctt
gtgaagggttctgagcgcttctatgaccggggcgaagtgcgacgcagccttgacgctttg
gctcggcttgctgctgatgaaccaggtgcggatccgctacgggcttttgatcggatactc
gcagctcaaggttggtcggctatcgcacccgagggagaaggtgatgtccggcaacggtgg
gaatcgttgcaagctttgcacgacctgacggtctcggttgtagacgacgggacgaggacg
ctggaacaactggcagccgtgttctcccgtcgggcggccactcaggaggcgccggtcggc
gacggcgttaccttggcaaccttgcatgcatctaaggggctcgaatgggatgtcgtggcc
ctctatggcatcaatgacacgatggtgcccttcatcatggctgaagctccggctgagatg
gcttcggaacgtcggttgttgcatgttggcgtaactcgagcacgacgagacctgtgggtc
tcatactcgtggtctggagggaaccgggaccggcaggggatctcgcgatttttgcgcggc
ctccctgggacaggggaaatgaccgacaaacccccgcgacatcgccggaaacgtcgtgcc
acgatcacagtctgctcggtgtgcggcaaagcccttacggcggccagagaccgaaaactc
ggccatcaccttgcctgcgaggttggggtcgacccagctctcgtcgagaggttgcggcag
tggcgcagcgaacgcgcggaagccgatcgagtgccagctttcgtcattctcacggacgct
accttgctgggcgtggcggagaaacgacctgactctatggaaggtttattgcagattccc
ggagttggcaggcgcaaggccgatctttacgcggctgatctcatcaaggtgctgcacggt
tcttcggataaccaacagtga
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