Cutibacterium acnes HL096PA1: PAGK_1088
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Entry
PAGK_1088 CDS
T02638
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pach
Cutibacterium acnes HL096PA1
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pach03016
]
PAGK_1088
Enzymes [BR:
pach01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PAGK_1088
Transfer RNA biogenesis [BR:
pach03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PAGK_1088
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGJ79929
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All DBs
Position
1216598..1217836
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AA seq
412 aa
AA seq
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MSDLPILAEPREGVPPVVNTPDSLTHTCRALSNGHGPIAIDTERAHGFRYSPRACLIQLR
RDGSGTHLVDPLALGGAVGLKPLAKALAGTQWILHAATQDMPCLAMDGLRPDDLFDTELA
GRLLNLPRVSLGPMVERYCGVTLLKEHSASDWSRRPLPRDWQVYAALDVELLNDLREKIL
SDLHEAGKEEWARQEFAHLVEVAADLPSEEPGIDPKRWRKLSHIGDIHSRAGLQLAHDLW
LARENLAHDLDIMPGRLLRDEALVAAARHCDRTGNVDVETVLAIRGFHRGRAKKYRQTWA
EAINHARSVSPTKYPPLREPSSGIPHPRSWERHHPEEAARWAAVRPAVNDVAADHDVPPE
NLCTPTWLRHFAWQPPEDCSVEGVDVFLEGLGARPWQREILSGPLSAVMATL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacctccctatccttgctgaacctcgcgagggagtgccgccggtcgtcaacact
cccgacagtctcacgcacacctgtcgggccctcagtaacgggcatggtccgattgcgatc
gacactgaacgagcccacgggtttcgctatagcccccgggcttgcctcatccagctacgc
cgagacggatcgggcacacacctcgtcgatcccctcgctctcggtggagccgtcggcctc
aagcctctcgccaaggcgctggctggaacccagtggattcttcacgccgccacgcaggac
atgccctgccttgccatggacggcctgcgtcctgatgacctcttcgacactgaactggca
ggtcgtcttctcaacctgccgagggtcagcctgggcccgatggtcgagcgttactgcgga
gtgaccctacttaaggagcactccgcctctgattggtcgcgtcgacccctcccccgcgat
tggcaggtgtacgcggcccttgacgtcgaactcctcaacgacctcagggaaaagatcctt
agcgatcttcatgaagctggaaaagaagaatgggctcgtcaggaatttgcccatcttgtc
gaggtagcagcggacttgccgagcgaggaaccaggaatcgatccgaagcgctggcgcaag
cttagccatatcggtgatattcacagtcgggctggactgcaattagcgcacgatctgtgg
ctagcacgagagaacctcgcccatgacctcgatattatgcccggacgtctgctccgtgac
gaagccttggtcgccgcggctcgtcactgcgaccgcactggcaacgttgacgtcgaaaca
gttcttgccatcaggggatttcatcgaggacgggcgaaaaagtaccgccaaacctgggcc
gaggccatcaaccacgcacgaagcgtgtcaccgacgaagtatccgccgttgcgggagcca
tcctcaggcatcccccacccccggtcgtgggagcgccatcatccggaggaagccgcacgg
tgggcagccgtaagaccagccgtcaacgacgtggccgccgaccatgacgtcccacccgaa
aacctctgcaccccaacatggctgaggcattttgcatggcaaccgcctgaggattgttca
gtcgagggggttgacgttttcctggaggggctcggcgcacggccgtggcaacgggagatt
ctctcggggccgctaagcgcggttatggccacgctgtga
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