KEGG   Cutibacterium acnes HL096PA1: PAGK_1121
Entry
PAGK_1121         CDS       T02638                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
pach  Cutibacterium acnes HL096PA1
Brite
KEGG Orthology (KO) [BR:pach00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PAGK_1121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pach03021]
    PAGK_1121
Transcription machinery [BR:pach03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PAGK_1121
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AGJ79962
LinkDB
Position
complement(1252265..1253785)
AA seq 506 aa
MSTTTSSTANTAADEEAKIATARKSTRSTSAKTGTTGRAKKTTATKASQSSAHKSAGGAK
TPTAKSSGAKTTTKPTSTKTAAKSTKTAASKTTKSSGTKTVGNASSGGAKKSTTKRRTTK
AKKETTVAEAASGEVDVTVERDGDDVVLTIGGKKRSLDDVDERDYDPAEAAKDEQQINKE
TEAFSLSDNDDADEPEQTVMVAGATADPVKDYLKQIGKVALLNAVEEVDLAKRIEAGLFA
GEQLADPDAKIREKDREDYEWIAEDGKVAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQ
EGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKLARV
QRQMLQDLGREPTPEELASELDMTAEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDS
EAIVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRER
IRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1521 nt   +upstreamnt  +downstreamnt
gtgtcgaccaccacgtccagcactgcaaacaccgctgcagacgaggaggcgaagatagcc
accgcgaggaagagtacacgttccacctctgctaagaccggtacgaccggtcgggcgaag
aagaccactgcgacgaaggcaagccagtcgtcggctcacaagtccgctggtggggccaag
actcccacggctaagtcatctggggccaaaaccacgacgaagcccaccagcactaagacg
gccgcgaagtccaccaagacagcggcgagtaagacgacgaagtcttcgggtacgaagact
gttggaaacgcgtcgtccggtggtgccaaaaagtcgacaactaagaggcggaccactaag
gcgaagaaggaaacgaccgtcgccgaagccgcatccggtgaggtcgatgtgaccgtggag
cgcgacggtgacgacgttgtgctgactattggcggcaagaagcgctccctcgacgatgtt
gacgagcgtgactacgacccggccgaggctgctaaggacgagcagcagatcaacaaggag
accgaggcgttctccttgtctgataacgatgacgctgacgagcccgagcagaccgtcatg
gtcgccggcgctaccgcagatcccgttaaggattaccttaagcagatcggcaaagtagct
ctgctcaatgccgtcgaagaggttgatctcgccaagcgcattgaggccggtctgtttgcc
ggcgagcagctagccgacccggatgccaagatccgggagaaggaccgcgaggattacgag
tggatcgccgaggacggcaaggtggcgaagaaccacctattggaggccaacctccgtctg
gtcgtctccttggctaagcgttacaccggtcgcggcatgctcttccttgacctcattcag
gagggcaacctcggtctcattcgtgccgtcgagaaattcgactataccaagggctacaaa
ttctctacgtacgcgacgtggtggatcaagcaggccattacccgcgccatggccgaccag
gctcgtactattcgtatccctgtgcatatggtcgaggtcatcaacaagctggctcgcgtc
cagcgtcagatgctccaggacctaggtcgtgagcccaccccggaagagcttgccagcgaa
ctcgatatgaccgcagagaaggtcattgaggtgcagaaatacggtcgcgagccgatctcg
ctgcataccccactgggtgaggatggcgattctgagtttggtgaccttattgaggattct
gaggccatcgtgccagcagacgccgtcaacttcaccctgttgcaggagcagctgcatgat
gtcctcgataccttgtccgagcgagaggccggtgttgtgtcgatgcgattcggcttgacc
gacggacagcccaagaccctggatgagatcggcaaggtctacggtgttactcgggagcgc
atccgccagatcgagtccaagaccatgtcgaaactgcgtcatccgagtcgctctcaggta
ctgcgcgactacctcgactga

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