Cutibacterium acnes HL096PA1: PAGK_1308
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Entry
PAGK_1308 CDS
T02638
Name
(GenBank) putative ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAGK_1308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pach03019
]
PAGK_1308
03009 Ribosome biogenesis [BR:
pach03009
]
PAGK_1308
Enzymes [BR:
pach01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PAGK_1308
Messenger RNA biogenesis [BR:
pach03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PAGK_1308
Ribosome biogenesis [BR:
pach03009
]
Prokaryotic type
rRNA processing factors
PAGK_1308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
S1
Motif
Other DBs
NCBI-ProteinID:
AGJ80138
LinkDB
All DBs
Position
complement(1452479..1455103)
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AA seq
874 aa
AA seq
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MLDETDNTTLNSGGNSTSGIPAPRRRRAASRPAGAPAPVETMGTPVAIAAAGSGGSIVTS
DVEVSDLPRPPMGRRRKATSTPRDVKTDVPKVVALEPTPEEPESADTRTEEKPRRTRRGA
SETAPSTEAERGTSQRRRATRRRSSRTAEKVEETTEATTATNKGDGADDDPINVALTEAK
ARARNHKVEGALANPFGFKEGEERSASDILDSLAVEIGGGEAAMPKRRRRRATRPSEAGS
HSAETSGSTDKVAPVEEDKGEVKDRHSSDKKSEKSDYDTTDAVEETAADTEEDGQNRRRR
RRGGRRRRRSEDTEDSASEDESSDSDDSQTSSDNDSESSSSDATHRRRRRRRRRGEDISG
SDDDPSDVVIKVREPRSRQSVADEVTGIEGSTRVEAKKQRRREGRAAGRRRSAVITDAEF
LARRESVDRKMIVRQSDDYSQLAVLEDGVLVEHYVDRASATSSIGNIYLGKVQNVLPSME
AAFIDIGRGRNAVLYAGEVDWAKYGKEGEDKRIEHVLKSGDQVLVQVTKDPVGAKGARLT
SHISVPGRFVVYSPGGHLSGISRKLADSERKRLKKIVENNIPSDASVIVRTAAEGATEED
LVRDINRLKVQWEVIERKVSNSKAPLMLYTEPDLTVRIIRDLFTADFSELVIAGNGGPDD
AYDTIKAYVDHVAPEMTSRLIHWEHTDKDPFAEYRIDEQVAKALERKVYLPSGGSLVIDR
TEAMTVIDVNTGKFTGSAGNLEATVTANNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLPT
NRELLVRRLTECLGRDRTRHQVAEVTSLGLVQMTRKKIGTGLAEAFTEQCEACGGRGYRR
FDKPVDSQAPADGGERSKGRGRGHKGSSGKSHSK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgagactgacaacaccacactgaactctggcgggaattccactagtggaatt
cccgctcctcgacgtcgtcgggccgcgtcgcgccccgctggggctccggcccccgtcgag
acgatgggcacgcccgtggcgattgctgccgcaggatcaggtggttcgattgttacttcc
gatgtggaggtttctgatctgccgcgtcctccgatggggcgacgtcgcaaggcgacgagc
actccgcgcgacgttaagactgatgttccgaaggtcgtcgccctagagccgacgccggag
gagcccgagtccgcggacacaaggaccgaggagaagccgcgtcgtacccgtcgtggtgct
tctgaaaccgcgccgtccaccgaggcagagcggggtacctcccagcgtcgtcgcgccact
cgccgtcgctcctctcgaaccgcagaaaaggtcgaggaaacgactgaggcgacgaccgcg
accaataagggcgatggtgctgacgacgatcccatcaatgtcgcactgactgaagccaag
gcccgggctcgtaaccacaaggttgagggtgccctagctaacccctttggatttaaagaa
ggcgaagagcgctcagcgagcgacatcctcgactctctggccgttgagatcggtggggga
gaggctgctatgccgaagcgccgtcgccgtcgtgccactcgaccttccgaggctggtagt
cactctgcggagacctccgggagtactgacaaggtggccccggttgaggaggataagggc
gaggtcaaggaccgccacagttccgataagaagagcgagaagtctgattacgacaccacg
gatgcggtggaggagactgccgctgacaccgaggaggacggccagaaccgtcgtcgccgt
cgtcgcggtggacgtcgccgtcgtcgcagtgaagataccgaggacagcgcatccgaggac
gagtcgagcgatagtgacgactcacagaccagctctgacaatgattctgagtccagtagc
tcggacgccacccaccgtcgtcgtcgtcgccgtcgtcgtcgtggcgaagacatcagcggt
tctgacgatgatcccagcgacgtcgtcatcaaggtgcgcgagccgaggtcgcgtcagtcg
gtggctgatgaggtcactggcatcgagggttcgacccgtgtcgaggctaagaagcagcgt
cgtcgggaaggacgtgccgccggacgtcgccgcagtgccgtcatcaccgacgcggagttc
ctggcccgtcgcgagtcggtcgaccgcaagatgattgtgcgtcagtctgatgactactct
cagctggcggtgctggaagatggggtgctcgttgagcattacgttgatcgcgcttctgcc
acctcctcgatcggcaatatctacctgggcaaagtgcagaacgtcctgccgtcgatggag
gccgccttcattgacattggtcgtggtcgcaacgctgtgctctacgccggagaggttgat
tgggccaagtatggcaaggagggcgaggataagcgcatcgagcacgtgctaaagtccggt
gaccaggttctggtacaggtcaccaaggatccggtgggtgccaagggtgcccgtttgacc
agccatatttcggtacccggacgctttgtcgtctattcgcctggcggccacctttcgggg
atttctcgcaagctggctgattcggagcgcaaacgccttaagaaaatcgttgagaacaac
atcccgtcggatgcttccgtcatcgtgcgcactgccgcggaaggagccaccgaggaagac
ctggtccgtgacattaaccgtcttaaggttcagtgggaggtcattgagcgcaaggtcagc
aacagcaaagctccgctgatgctatacaccgagcctgatttaacggtgcgtatcatccgc
gacttgttcactgcggacttctccgagcttgtcatcgccggcaacggtggccccgatgac
gcctacgacaccattaaggcctacgttgatcacgtggctccggagatgacgtcgcggcta
atccattgggagcacaccgacaaggacccctttgccgagtaccgcattgacgagcaggtc
gcgaaggcattggagcgcaaggtttacctcccgtcgggagggtcccttgtcattgaccgc
accgaggctatgacggtgatcgacgtcaataccggaaagttcaccgggtcagcgggtaac
cttgaggccactgtcaccgctaacaacttggaggcggctgaggagatcgtgcgtcagcta
cgactgcgcgatattggcggaatcatcgtcattgacttcatcgacatggtgctgccgacc
aaccgtgaacttcttgtgcgtcgtctcaccgaatgcctgggccgggatcgtacccgacac
caggtcgctgaggtgacatcgctgggcttagttcaaatgactcgcaagaagatcggtacc
gggctggctgaggctttcactgagcagtgcgaggcctgtggcggtcgcggctaccgccgc
ttcgataagccggtcgattcccaggctccggccgacggtggcgagcgctcgaagggtcgt
ggtcgcggtcataaaggctcgtcgggcaagtcccactccaagtga
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