Cutibacterium acnes HL096PA1: PAGK_1749
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Entry
PAGK_1749 CDS
T02638
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAGK_1749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pach03021
]
PAGK_1749
03400 DNA repair and recombination proteins [BR:
pach03400
]
PAGK_1749
Enzymes [BR:
pach01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAGK_1749
Transcription machinery [BR:
pach03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAGK_1749
DNA repair and recombination proteins [BR:
pach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAGK_1749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGJ80559
LinkDB
All DBs
Position
complement(1942862..1943878)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLTEESISEFRSKFVIEPLEPGFGYTIGNSLRRTLLSSIPGASVTSIKIEGVQ
HEFSTIEGCVEDVTEIILNLKGLVLSSEEDEPVAMYLRKSGAGEVTAADINPPAGVTIHN
PELHIATLNDDGRFEMELIVERGRGYVSSALNDDPNAEIGRIAVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVVDVETKPSILPRDAIASAGKTLVELFGLTRELNAEAEGIEIGSGPVD
EEYAESLGTPVEELNLTVRSYNCLKREGIHTVGELVSRSEQDLLAIRNFGSKSIDEVKEK
LTELGLALKDSAPGFDPLAAAEAYDEANDDDYAETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcattgcacagcgccccactctcactgaagagtccatctccgaattccgctcgaag
ttcgtcatcgagcctctggagccgggtttcggatacaccattggcaactcgctgcgtcgc
accctgctgtcgtccatcccgggcgcctctgtgacgagcatcaagatcgagggagtccag
cacgagttctcgactattgagggctgtgtcgaggacgtcaccgagatcattctgaacctc
aagggccttgtgctctcctcggaggaagacgagccggtcgccatgtatctgcggaagtcc
ggtgccggcgaggtcaccgctgccgacattaacccgcctgccggtgtgaccatccacaac
ccggagttgcacatcgcaaccctcaacgacgatggccgcttcgagatggaacttattgtc
gagcgtggccgcggctacgtctctagcgccctcaacgacgatccgaatgccgagatcgga
cgcatcgccgtcgactcgatctactccccggttctcaaggtcacctacaaggttgaggcc
acccgagtcgagcagcgcacggacttcgacaagctcgttgttgacgtcgaaaccaagccg
tccatcctccctcgcgacgccattgcctccgctggcaagaccctcgttgagctgttcggg
ctgactcgcgagctcaacgctgaagctgagggcattgagatcggttccggaccagtcgac
gaggagtacgccgagagcctgggcaccccggtcgaggagctcaacctcaccgtccgttcc
tacaactgcctcaagcgtgagggcatccatactgttggagaactcgtctcgcggtctgag
caggacctgctggccatccgtaactttggatccaagtcgatcgatgaagtcaaggaaaag
ctcaccgagcttggcctagccctcaaagactcggctccggggtttgacccacttgccgca
gctgaggcctacgacgaggccaatgacgacgattacgcggagactgagcagtactga
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