Pediococcus acidilactici: A4V11_00635
Help
Entry
A4V11_00635 CDS
T04512
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
paci
Pediococcus acidilactici
Brite
KEGG Orthology (KO) [BR:
paci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paci03019
]
A4V11_00635
Messenger RNA biogenesis [BR:
paci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4V11_00635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AOW73594
LinkDB
All DBs
Position
143025..143972
Genome browser
AA seq
315 aa
AA seq
DB search
MTKKLIDFQNDEEMELFVLIKNAEKRVTKTGKDFISLVFQDRSGEIRGNYWDATATDFEQ
FQSGRVVLLKGKRETYKGAPQVKIMAMRLATEEEPADPTAYTEKAPVSVTELREAFAQLV
FEINNPDLNRVVRYLLKKYDQQFFDFPAAKSNHHAFEGGLAFHTLSIVKLAKAVAQQYEN
IDQSLLIAGAILHDLGKTIELSGPVATQYTVEGNLLGHIVIIDEEVVEAAQALKIDPNGE
SLVVLRHLLVSHHGLREYGSPIEPHMLEAVVLHSLDDLDAQIQMVSGALKNTDEGHFSER
IFGMNGRRFYKPQTK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgactaaaaaattaattgattttcaaaatgacgaagaaatggaactttttgtcctgatt
aaaaacgccgaaaaacgagtgaccaagactggcaaagactttatctcgctcgttttccaa
gaccgttctggtgaaattcgggggaattattgggatgcaaccgccactgattttgaacaa
tttcaatctgggcgggtggttcttctaaaggggaaacgtgaaacttataagggagctccc
caggttaaaattatggcaatgcgtctggcaaccgaagaagaacctgccgaccccacggcg
tacactgaaaaagctccggtttcggtgactgaattgcgggaagcctttgcgcaattagta
tttgaaatcaataatccggatttgaaccgggtggtccgttacttactaaagaagtatgat
cagcaattctttgattttccggcggctaagtcgaatcaccacgcttttgagggaggatta
gctttccatactttatcaatcgttaaattggccaaggcggttgcacagcaatatgaaaat
attgatcagtcgttattaattgccggcgcaattttgcatgatttaggtaaaaccatcgaa
ctttctggaccggttgctactcaatatacggtggaagggaaccttctggggcatattgta
attattgacgaagaggtagtggaggctgctcaagcactgaaaattgatccgaatggagaa
tctttagtggtattacgtcatctgttagtttcccaccatggattacgggaatacgggtca
ccaatcgagccccacatgcttgaagcagtggtgcttcattcgctagatgacctagatgcc
caaatccaaatggtctcgggagctttaaagaatacggatgaaggtcattttagtgaacga
atttttggaatgaatggacggcggttctataagccacaaactaagtaa
DBGET
integrated database retrieval system
