KEGG   Pediococcus acidilactici: A4V11_01825
Entry
A4V11_01825       CDS       T04512                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
paci  Pediococcus acidilactici
Brite
KEGG Orthology (KO) [BR:paci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paci03032]
    A4V11_01825 (gyrB)
   03036 Chromosome and associated proteins [BR:paci03036]
    A4V11_01825 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:paci02048]
    A4V11_01825 (gyrB)
Enzymes [BR:paci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     A4V11_01825 (gyrB)
DNA replication proteins [BR:paci03032]
 Prokaryotic type
  DNA Topoisomerases
   A4V11_01825 (gyrB)
Chromosome and associated proteins [BR:paci03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    A4V11_01825 (gyrB)
Prokaryotic defense system [BR:paci02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    A4V11_01825 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: AOW73824
LinkDB
Position
complement(383620..385665)
AA seq 681 aa
MAKTGKTTYDDSSIQVLEGLEAVRKRPGMYIGSTDGRGLHHLVYEIVDNAVDEALAGYGK
EINVTIRSDNSITVVDHGRGMPVGMHKSGKPTAEVIFTVLHAGGKFGQGGYKTSGGLHGV
GASVVNALSEKLTVEIVRDKMKYEENFVNGGHPVGTLKKVGKTKESNGTTVTFKPDPTIF
TTTVFNFNTLAVRLRESAFLLKGVKITLTDERAGHEQAEEYLYEEGIKEFVEYLNEDKDT
LGNIMYFDGSKHGIEVEIAGQYNDGYSETVLSFVNNVRTKDGGTHEAGMRSGWTKAFNEF
ARKVGLLKEKDKNLEGSDVREGLSAVISIRVPEELLEFEGQTKEKLGTPEARPIVEAVVS
EQLGFFLMENGEFAQQLVRKAINARDARVAARKARDESRTGKRRKKQDRILSGKLTPAQS
KNAKKNELFLVEGDSAGGSAKQGRNRKFQAILPLRGKVLNTEKAKLQDIVKNEEINTIIY
TIGAGVGPEFKVEDSNYDKVIIMTDADTDGAHIQTLLLTFFYKYMRPMIDAGKIYIALPP
LYKLQKGANKKTKIEYAWTDEELEEVSKKMGRGFSLQRFKGLGEMNADQLWETTMNPDTR
TLVRVRIDDDTLAERRVTTLMGDKVEPRRKWIESNVSFTLEEDGSLLDNEAVKAEHESKP
TTPKGKENETFEELKLDLENN
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcaaaaacaggtaaaacaacatatgatgattcttccatccaggtgcttgaagggctt
gaagccgttcgaaaacgccccggaatgtacatcggatccactgatggacgcggattacat
catctcgtttatgaaattgttgataatgcagtcgatgaagcgttagctgggtacggaaaa
gaaattaatgtcacaatccgctcagataacagtattacggtcgtggaccacggacgcgga
atgccagttggaatgcataagtctggcaaaccgactgccgaagtaatctttaccgtttta
cacgccggaggaaaattcggccaaggcggttataagacttcgggaggattgcacggagtg
ggggcaagcgtggtaaacgcattgtctgaaaaactaacggtggaaatcgttcgggacaaa
atgaaatacgaagaaaacttcgtgaatggcggacatccggtcggaacgctaaaaaaagtg
ggaaaaaccaaagaatctaacgggacgacggtaactttcaaaccggatccgacgattttt
accacgacggtttttaactttaacaccttagcggttcgactacgtgaatctgccttctta
ctaaagggggttaagattacccttactgatgaacgtgcgggacatgaacaagctgaagag
tatctttatgaagaagggattaaggagttcgtagaataccttaacgaagataaggatact
ctgggaaacatcatgtacttcgacggttctaaacacggcattgaagttgaaattgctgga
caatataacgatggttactccgaaaccgtgttgtcattcgttaataacgtccgaactaag
gatggtgggacccacgaagcagggatgcgttcgggatggaccaaggccttcaacgaattt
gctcgaaaagttggacttttaaaggaaaaagataaaaacttggaaggctctgatgttcga
gaaggtttgtcggcagtaatttcaattcgggttcctgaagaattacttgaatttgaagga
caaaccaaagaaaaattgggaactcctgaagctcgtccaattgttgaagctgtggttagt
gaacaactgggcttcttcttgatggaaaatggggaatttgctcaacaactagttcgtaaa
gcaatcaatgctcgcgatgcgcgcgtggctgcgcgaaaagcacgggacgaatcccgtacc
ggcaaacgtcgcaaaaagcaagatcggattttatctggtaaactgactcctgctcaatcc
aaaaacgctaagaaaaatgagttgttccttgtcgaaggggattctgcgggaggtagtgct
aagcaaggccgtaaccgtaaattccaagcaatcctgccgcttcgtggtaaggttttgaac
acggaaaaagctaaactacaagacatcgtaaaaaacgaagaaatcaacacgatcatttac
accattggcgctggagtaggccccgagtttaaggttgaagatagcaattatgacaaagta
attatcatgaccgatgcggataccgatggagcccatatccagacactattgttgacgttc
ttttataaatatatgcgtccaatgatcgatgctggtaagatttacatcgctttgccaccc
ctttataagttacaaaagggcgctaataaaaagactaagattgaatacgcgtggaccgat
gaagagcttgaggaagttagcaaaaaaatgggccgcggtttttccttgcaacggtttaag
ggacttggtgaaatgaacgccgatcagctatgggaaaccaccatgaatccggatacccgg
accttagtgcgggttcgaattgacgatgataccttagctgagcgccgggtaaccacttta
atgggggataaggttgaaccacgtcggaagtggattgaaagcaacgtttccttcaccctc
gaagaggatggtagcttgcttgataacgaagctgttaaagctgaacatgaatctaagcca
actacccctaaaggaaaagaaaacgaaacgtttgaagaattaaaattagatttagaaaat
aactag

DBGET integrated database retrieval system