Pediococcus acidilactici: A4V11_03305
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Entry
A4V11_03305 CDS
T04512
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
paci
Pediococcus acidilactici
Pathway
paci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A4V11_03305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paci03400
]
A4V11_03305
DNA repair and recombination proteins [BR:
paci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
A4V11_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
Rad17
AAA_28
nSTAND3
ATPase_2
NQRA_N
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AOW74093
LinkDB
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Position
complement(685930..688614)
Genome browser
AA seq
894 aa
AA seq
DB search
MPQKTSDTPMMRQYMEIKNQYPDAFLFYRIGDFYELFYDDAIKGSQLLELTLTARSKNAD
DPIPMCGVPHHAAQNYIDILVDQGYKVAICEQMEDPKAAKGMVKREVIQLVTPGTTTDQK
AEDAKENNYLTAVSFDAATKKYGFAYTDLSTGELKVAILDDIESVVNEAVGLRTREIVAD
QYFVEHFGERFKELNILVSQQNDVEISAELSYLIQDLTSPIAVQVVKQLLMYVQVTQKRN
LAHMQKAIAYEPSFYLRMDHASKYNLELTRLIRTGKKQGTLLWLLDETKTAMGGRLLKQW
LDRPLIRKDAINARQSRVQVLLEHFFERSNLQEELTKVYDLERLAGRVAFGNVNGRDLIQ
LKTSLLQIPKIRHVLAELDDPVFDEALTRLDPVNEIADLIEAAIDEDAPISVTEGNVIKD
GYNPKLDEYRDAMRNGKKWIADLQAQERQATGIKNLKIGYNKVFGYYIEVTRANLASVPE
GRYERKQTLTNAERFITPELKEKERIILEAEQKSTDLEYELFKKIRETIKEQIERLQNLA
KQVAELDVLQSFAVVSEEYQFVKPTMTESHEIEIKAGRHPVVEKVMGHQSYVPNDILMNQ
DTEILLITGPNMSGKSTYMRQLALTVIMAQMGCFVPAEEATLPIFDQIFTRIGAADDLIS
GQSTFMVEMQEANRALKDGTANSLILFDEIGRGTATYDGMALAQSIIEFIHQNVHAKTLF
STHYHELTALDQTLTRLKNVHVGAVEQDGNLVFLHKMEDGPADKSYGIHVAKLAGMPDSL
LARASVILEQLENENQGDAAKLTASETPQPVSTASQAAETQPADQSGAEESSVTSSSREV
VEEQMALFDTTPAQKKTNQLQTQVVEQLTNLNLMDMTPMEVMNQLYKWQKKLRK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaagacaagtgatacgccaatgatgcgtcaatatatggaaattaaaaaccag
tatccggatgcttttttattttaccggatcggggatttttacgagttgttttacgacgac
gccattaagggttcacagctgctagaattgacgcttacggcaaggtcgaaaaatgcggac
gaccccattccaatgtgcggagtgccgcatcatgccgcccaaaattacatcgacatttta
gttgaccaagggtataaagtggcaatttgtgagcagatggaagaccctaaggccgccaaa
ggaatggtgaaacgggaagtaatccaactcgttaccccaggtaccactacggatcaaaag
gcggaagacgctaaggaaaataactatttaacggcagtgagttttgacgctgcaactaaa
aagtacgggtttgcgtacacggacctgtcaaccggtgaattgaaggtcgcaattttggac
gatattgagagcgtggtcaacgaggctgtaggattacggacccgtgaaattgttgcggac
cagtattttgtggagcactttggggaacgttttaaagaattaaacattttagtttcgcaa
caaaatgacgtcgaaatctcggcagaattaagttatttaattcaagatttgacgtcccca
attgccgtgcaagtggttaaacaactattaatgtacgttcaagttacccaaaagcgcaat
ctggcgcatatgcaaaaagcaattgcgtacgaaccatcgttttacttacgaatggaccat
gcgtcaaagtataacctcgagttaactcgcttaattcgaacggggaaaaaacaaggaacg
ctattatggttgttagatgaaacgaaaacggcaatgggaggtcggctattaaaacagtgg
ctggaccgtccgttaattcgtaaggacgctatcaatgctcggcaaagtcgcgtgcaggtt
ttattagaacacttttttgaacgaagtaatttgcaagaagagttaactaaagtttacgat
ctggagcgactagctggccgggttgcctttggaaacgtgaatggtcgggacttaattcaa
ttaaaaacctcgctattgcaaattcctaaaattcggcacgtactagcggaattggacgac
cccgttttcgacgaggcccttacgcggttagatccggttaacgaaattgcggacttgatt
gaagcggccattgacgaagatgccccgatttccgttacggaaggtaacgttattaaagat
ggctataatcccaagttagacgagtatcgggacgccatgcggaacggtaaaaaatggatt
gctgacttacaagcccaagaacgccaagcaaccggaattaaaaaccttaaaattggctac
aacaaagtgtttggctactacattgaagtcacgcgggctaatttagctagcgtaccggaa
ggacgttacgagcgtaagcaaaccttaacgaatgccgaacggttcattactcccgagctc
aaggaaaaggaacgaatcatcctagaagccgaacaaaagtcgacggatttagagtacgag
ttgttcaaaaagattcgagaaacgattaaagagcaaattgaacgccttcaaaaccttgct
aagcaggttgcggaattagacgttttacaaagttttgcggtagttagcgaagaataccaa
ttcgttaaaccaaccatgacggaatcccatgaaattgaaatcaaagccggccgtcatccg
gtggttgaaaaggtaatggggcatcaaagttacgtccctaacgatattttaatgaatcag
gatacggaaattttactaattaccgggccaaatatgtctggtaagagtacttacatgcgc
cagcttgcgttaaccgtcattatggcgcagatggggtgttttgttccagctgaggaagct
acgttaccaatttttgaccaaattttcacccgcatcggagctgctgatgatttaatttct
ggtcagagtaccttcatggttgaaatgcaggaagctaaccgggcgttaaaggacggaact
gcaaacagcttgattctctttgatgaaattggtcggggaaccgcaacctatgatggaatg
gcgttagcacaatcaattattgaatttattcatcaaaatgtgcatgctaagaccctgttt
tcgacccattaccacgagttgacggcacttgaccagacgctgacacggttgaaaaacgtg
cacgtcggtgcggtagaacaggatggcaatttagttttcttgcataagatggaagacggc
cccgcagacaagtcatacggaattcacgttgctaagttagcgggaatgccggattcatta
ttggcaagggcatccgtaattctagaacagttagaaaacgaaaaccaaggtgatgctgca
aagctaaccgcaagtgaaacaccacaaccagtttccaccgcttctcaggctgcggagacg
caaccagctgaccaatccggcgcggaggaaagttcagtaacaagctcttcgcgggaggtt
gtagaagaacaaatggcgctctttgacaccactccagcgcaaaagaaaacgaaccagtta
caaacgcaagtagtagaacagctaactaacctaaatttaatggatatgaccccgatggaa
gttatgaatcaattgtataagtggcaaaagaagctacgaaaatga
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