Pediococcus acidilactici: A4V11_04005
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Entry
A4V11_04005 CDS
T04512
Name
(GenBank) DNA recombinase
KO
K06400
site-specific DNA recombinase
Organism
paci
Pediococcus acidilactici
Brite
KEGG Orthology (KO) [BR:
paci00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
A4V11_04005
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Spherulin4
MutS_III
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
AOW74224
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Position
834177..835754
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AA seq
525 aa
AA seq
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MSKVHIIPAHQQRGNSVHRLPDEPQSEKLRVAAYCRVSTELDEQANSYETQVSHYKELIQ
KDPSWEMAGIFADDGISGTNTKKREQFNKMIAACKAGKIDLIVTKSISRFARNTIDCLKY
IRDLKAINVAIFFEKENINTMDAKGEVLITIMASLAQQESESLSQNVKMGIQYRYQQGKV
FVNHNHFLGYTKDDQGNLVIEPEEAKVIKRIFYSYLNGMTMKQIADSLKADGILTGGKTK
NWRSSGVAKILKNEKYMGDALLQKTYTVDFLNKKRVKNEGIMPQYYVENDHPAIIPKSVF
MQVQQLIKQRRNGITTKNGKHRRLNGKYCFSQKVFCGKCGDILQRNMWYRPEKVAVWRCA
SRIRRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELASKQIKANIMKVIKNSKGPTL
DQIDHQLEKVQMKLIQAANQHQDCDALTQQIMDLRKQKEKVQSRETNQQAKLHSLDEINK
LVELHKYGLVDFDEQLVRRLVEKITIFQRYIEFTFKDGEVIKVKM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaagttcatattattcctgcccatcagcaacgtggcaatagtgtccaccgttta
ccagatgaaccacaatcagaaaaactacgagttgcggcctactgtcgggtttcaactgaa
ctcgatgaacaagctaactcatatgaaacacaagttagtcactataaagagctgattcaa
aaagatcccagctgggaaatggctggcatcttcgccgatgatggaatctctggaaccaac
accaagaagcgagaacagttcaataaaatgattgccgcttgtaaagctggtaagattgac
ttaattgtcaccaagtcaattagccgatttgctcgaaatactattgattgcctgaagtat
atcagagacttaaaagctatcaatgttgcaatcttctttgaaaaagaaaatatcaacacc
atggatgccaaaggtgaagtgctcattaccatcatggcatcgttagcccaacaagaaagt
gagtccttatcgcaaaacgttaaaatggggattcaataccgttaccaacaaggtaaagtg
tttgtcaatcataatcacttcctcggttacactaaagatgatcagggaaatctagtaatt
gaaccagaggaagcaaaggtcattaaacggatcttctatagctacctaaacggaatgact
atgaaacaaatcgccgattcgctcaaagctgatggtatcttgaccggtggcaaaacaaaa
aattggcgctctagcggcgtggctaaaatacttaagaacgagaaatatatgggtgatgct
cttctgcagaaaacctacactgttgactttcttaataaaaaacgagtgaagaatgaaggc
atcatgccccagtactacgtggagaatgatcacccggcgattattcctaaatcagtattt
atgcaagtccagcaactcattaagcaacggcgtaatgggattaccacaaagaacggcaag
caccgtcggcttaatggcaaatattgcttctctcaaaaagtattttgtggtaaatgcggt
gacattttgcaacggaatatgtggtatcggccagagaaagtagcggtctggcgctgtgct
agccggataaggagaagtaaaactggccggcggtgtatgatcaggaatgtcaaagagcca
ttgctaaaagaagccactgttgaagcattcaatcaattaatcgaaggccacgagttagcc
agtaagcaaattaaagctaacatcatgaaggtcatcaagaactccaaaggaccaacactt
gatcaaatcgaccaccagctggaaaaagtgcagatgaaattgattcaagctgccaaccaa
caccaggattgtgatgcgctaacccaacaaattatggaccttcgcaaacaaaaagaaaaa
gtacagagtcgggaaactaatcaacaagccaaactacacagccttgatgaaatcaacaaa
ttagtcgaattgcacaagtatggcttagttgactttgatgaacaattggttcgtcgcttg
gtagaaaaaatcaccatctttcaacgttacatagagttcacattcaaagatggtgaggtg
attaaagttaagatgtaa
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