Pediococcus acidilactici: A4V11_04705
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Entry
A4V11_04705 CDS
T04512
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
paci
Pediococcus acidilactici
Brite
KEGG Orthology (KO) [BR:
paci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paci03009
]
A4V11_04705
Enzymes [BR:
paci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
A4V11_04705
Ribosome biogenesis [BR:
paci03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A4V11_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
AbiEi_3_N
Motif
Other DBs
NCBI-ProteinID:
AOW74349
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All DBs
Position
complement(952229..953107)
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AA seq
292 aa
AA seq
DB search
MRYRIENNLEEIISAQKVLQRLGASQRLMQKIRQAGRLVDENERTVALKDKIMPFEPFWI
ELPDEDSDPAVPVSDQPLDIIYEDDNWLVVNKPAGLTAVPGPSNRTDTLVNRIKGHWQAN
GAVNLVPHLITRLDRFTSGITLVARHQVANSLLSEQVRHRKIKKTYLALVDGVVSAEKGT
FNQPLGLAADGIHREVQEGGQSATTSFKVVQRFANQTLVQVHLKTGRTHQIRVHFANAGH
PLVGDQLYGGPMDRGIERQALHAQSIRFFDPFTNQKLEFTAPLPADLQAIGM
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgatatcgaattgaaaataatttagaagaaattattagtgcacaaaaagttttacaa
cggttaggagccagtcaacggttaatgcaaaaaattcgccaagccgggcggttagttgac
gaaaacgaacggacggtggcgttaaaagacaagattatgccctttgagcccttttggatt
gaactgccggatgaggattctgacccagcggtgccagttagtgatcaaccgctcgacatt
atttatgaagatgataattggttagtggttaataaacctgcgggcctaactgcggttccc
ggaccaagtaaccgtacggataccttggttaatcggattaaggggcactggcaagctaac
ggagcagttaacttggtaccccatttaatcacccggttggaccggtttacaagcgggatc
accctcgtagcgcgtcatcaagtggctaacagccttctaagcgagcaagtacgtcatcga
aagattaaaaaaacgtaccttgcgttagttgacggagtggttagtgctgaaaaagggacc
tttaaccagccgctaggactagctgccgatggaatccaccgggaggttcaagaaggcgga
caaagcgccacgaccagctttaaagtggtccaacgttttgcaaatcaaacgttggtacag
gttcatttaaaaactggacgtactcaccaaatccgcgtacactttgccaacgcgggccat
ccgttagtgggcgaccaactatatggtggtcccatggatcggggaattgagcgacaggct
ttgcacgcgcaatccatccgcttttttgatccgttcacgaatcagaaattagagtttacg
gctcccttgcccgcagacttacaagcaatcgggatgtag
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