Pediococcus acidilactici: A4V11_04920
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Entry
A4V11_04920 CDS
T04512
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
paci
Pediococcus acidilactici
Brite
KEGG Orthology (KO) [BR:
paci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paci03400
]
A4V11_04920
DNA repair and recombination proteins [BR:
paci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A4V11_04920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
ABC_tran
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_14
Rad51
KTI12
DUF7125
AAA_24
AAA_5
CbiA
divDNAB
AAA
NACHT
KdpD
NTPase_1
Zeta_toxin
AAA_31
TniB
AAA_19
GvpD_P-loop
NPHP3_N
ATPase_2
RsgA_GTPase
Rad17
AAA_18
AAA_11
MCM
MMR_HSR1
ArsA_ATPase
HypA
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AOW74390
UniProt:
A0AAN5Y9S9
LinkDB
All DBs
Position
complement(993028..994398)
Genome browser
AA seq
456 aa
AA seq
DB search
MAKVKTQFVCNNCGYASPKFLGRCPNCGKWNTLVEERMSDPKAERKSRVSFDGKHTQPQL
ISDVAMHEEPRVKTGMEELNRVLGGGVVDGSLVLIGGDPGIGKSTLLLQLSGQLAETQRK
VLYVSGEESASQIKMRAERLKVNSERFYLYPETDMSSVRAVIEELHPEYVIIDSVQTMQE
PDIESAVGSVSQIREITAELMQIAKTNNITIFIVGHVTKGGAIAGPKILEHMVDTVLYFE
GDLHHTYRILRAVKNRFGSTNELGIFEMREEGLREVANPSEIFLEERLKDASGSAIVVSM
EGTRPILVEIQALITPTIFGNAQRTASGLDRNRVSLIMAVLEKRAKLTLQNQDAYLKAAG
GVKLDEPAIDLALAISIVSSFKNQGTRPTDSFVGEIGLTGEIRRVNRIEQRVAEAQKLGF
KRILIPKNNLKGWQPPEGIEVVGVATIADAIRRAFN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagttaagacccagtttgtatgcaataattgcggatacgcctcccctaaattt
ttaggacgctgtcccaattgtggtaagtggaacactttagttgaagaacggatgagcgat
ccaaaggctgaacgaaaaagtcgggtgagctttgacggcaaacatacgcaaccacagctg
atttcggacgtcgcgatgcacgaagaaccccgggtaaaaaccgggatggaagaacttaac
cgcgtgcttggtggcggggtggttgacggctccctagtcttaattggtggggatcctgga
atcggaaaatcaaccctgttgttacagctatcaggacagttggcagagacgcaacgcaag
gtactttacgtttctggtgaagaaagtgcttcccagattaagatgcgtgccgaacgattg
aaagtcaatagtgaacgcttctatttgtatccagagaccgatatgtctagcgtgcgggcg
gtgattgaggagttacaccccgaatacgtgatcattgattcggttcagaccatgcaggaa
ccggatattgaatcggcggtggggagcgtttctcaaattcgagaaattaccgcagaatta
atgcaaatcgcgaaaaccaataacattaccatattcatcgttggtcacgtgaccaagggc
ggcgcaattgcggggccgaagattttggaacacatggtggatacggtgctttactttgaa
ggtgatctgcaccacacttaccggatcctgcgagcggtgaagaaccggtttggttccacg
aacgaattaggaatctttgagatgcgcgaagaagggttacgcgaggtggctaacccgtca
gaaattttcttagaagagcggctaaaagatgcttcgggatcggcaattgtagtttcaatg
gaaggaactcggccgattttagttgaaatacaagccttgattacgcccaccatcttcggc
aatgcgcagcgcacggcgagcgggttggaccgcaaccgggtttcgctgatcatggcggtg
ctcgaaaaacgggcaaagcttactttgcaaaaccaagacgcctatttaaaggcggcgggc
ggcgttaagcttgacgaacccgcaattgacttagcgttggcgattagtattgtttcaagt
tttaaaaatcagggaacccggccgaccgatagttttgttggtgaaatcggcttaactggt
gaaattcggcgggttaaccgaattgaacaacgggtcgctgaagcacaaaagcttggtttt
aagcggattttgattccgaagaataatttgaaggggtggcagccccccgaaggaattgaa
gttgtaggggtagctacgattgccgacgcgattcggcgggcatttaattaa
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