Pediococcus acidilactici: A4V11_07595
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Entry
A4V11_07595 CDS
T04512
Name
(GenBank) transcriptional regulator
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
paci
Pediococcus acidilactici
Brite
KEGG Orthology (KO) [BR:
paci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paci03000
]
A4V11_07595
Transcription factors [BR:
paci03000
]
Prokaryotic type
Helix-turn-helix
Other families
A4V11_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA
EIIA-man
AAA_5
AAA_16
AAA_22
AAA_2
ResIII
RuvB_N
AAA_14
Mg_chelatase
HTH_Crp_2
nSTAND3
HTH_3
NACHT
Motif
Other DBs
NCBI-ProteinID:
AOW74888
LinkDB
All DBs
Position
1574513..1577251
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AA seq
912 aa
AA seq
DB search
MVKDQVAAMLQSVTEREDWQEHGATAEDFSQRLGVRRNTISAYLNDLYKEKVAIKLNSRP
VKFWDRATLEQRYGIILENTEFESQAALENIVSQPKRTAFDEVIGGHGSLYTPIERLKAA
AGYPGTGLPVLITGPTGAGKTYLAQVYYQYCVDKGYLAPESRFVHLNCAEYADNPELLAS
NLFGYKKGAFTGANQDSTGLFDEADGGMLFLDEIHRLDAKGQEKLFNYLDNGIITPLGAT
KEGHHVQVRLVFATTEDIQSHFLDTFIRRIPIQIEIPELNDRPRQERENLVKLFYLRQSQ
KIQRKVLVNTSVLNILSSSSYLGNVGQLKNTILISVANSLQRAAQSSNIEILLADVPKTV
IDHNIQDASLLSFSDQFISVLPTMKIDDLISESQAYTDEIKRVMLKIIQQFQQTAKRNAF
IDNAIDEINQLCDYLIFKKDTEKSDMSVGFLKKMFADRIANVENNSDTQFMGNVALVLAY
YFYNRNRANWHLVQRDEQCIQQINATFHGEDAEIDQIVGDLRLITAKTMNLHLDDVDELF
IHLYLRSVKKETNSQNIRCIILSHGYSTASSIASVINNLFNEHVMDAIDMPLDIDVAEIG
EKVSSYVKNRQINRGLILMVDMGSLEGIQKFISSEIDFPIAIVNNVSTQSALLVADDIRH
HKDIEQIMRNVRQAMVPKTQIIYPKEIKRNLIVTCCFTGIGTANSVKKLLLDSMPAEVDC
QIQAYEVDRLKAEEQIAIFNKLYNVVAVVGTIDPGLPDAPYISLESIISGSEMEKLDKAL
QVCMTTEQLQQFKEQLIHSFSLERVINSITILDAHLVMDNIDRAINKFNQLSGHQLGNIT
KMSLYVHVSCLIERLIRNEPITSYDLEQLSDTEDQRLFKWIKESFSVIEKIYSVEIPASE
YGYIFDIIQADA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggatcaagtagcagcaatgctgcaatcggtaacggaaagagaagattggcaa
gaacacggcgccaccgcggaggactttagccaacggttgggagtgcggcggaacacaatt
agtgcgtacttaaatgatctttataaagagaaggttgcaatcaaacttaattcacgtccg
gttaaattttgggatagggcaactttagaacaacgatacggcatcattttagaaaataca
gagtttgaaagtcaagcggcgttggaaaacattgtatctcagcctaaacggacggccttt
gacgaagtaattggcggacacggttcgctatacaccccaattgaaaggttgaaagcggcc
gctggctacccaggcaccgggttacccgtgttaattaccgggcctacgggagcagggaaa
acttatttagcgcaagtttattaccaatattgcgtggataaggggtatttagcaccagaa
tcccgctttgtacacctaaattgcgcggaatatgctgacaatccagaacttttagcaagt
aatttatttggttataaaaagggggcctttacgggcgcaaaccaagatagtacgggacta
tttgatgaagctgatggcggaatgctatttcttgatgaaattcaccggcttgatgctaag
ggacaggaaaaattgtttaattacttggacaacgggataatcacgccgttgggtgcaact
aaagaggggcatcatgtacaagttcggctagtttttgcgactaccgaagatattcaaagc
catttcttagacacctttattcgccgaatccccattcaaattgaaatcccagaactaaac
gaccgaccacgtcaggagcgcgaaaacttggttaagttattttacctccgccaatcccag
aaaattcaacgcaaagtgttagtgaatacctcggtgctgaatattttaagttccagcagt
taccttggtaacgtaggtcaattaaagaacaccatcttaatttcggtggccaatagttta
caacgggcggcgcaaagttcgaatattgaaatcttattagcagacgttcccaaaacggta
attgaccataatattcaagacgcgagtttgctatcgtttagcgaccagttcatcagtgta
ttgccaaccatgaaaattgatgatttaatctccgaatcccaggcgtataccgatgaaatt
aaacgggttatgttaaaaattattcagcaattccagcaaacggccaaacggaacgccttc
attgacaatgccatcgacgaaattaaccaactgtgtgactacttaatttttaagaaggat
acggaaaaaagcgacatgtcggtgggctttttgaaaaagatgtttgccgatcgaattgct
aacgtcgaaaacaatagtgacacccagtttatgggcaacgttgcgttagttttagcgtac
tacttttacaaccgtaaccgtgctaactggcatttggtacaacgcgacgaacagtgcatt
cagcaaattaacgccacttttcatggtgaggatgcggaaatcgaccaaattgttggggac
ctgcgtttaattaccgcaaagaccatgaatttgcaccttgacgatgtggacgagctattt
atccatctgtacttacggagcgtgaagaaggaaaccaatagccaaaacattcgttgcatt
atcctctcccacggctattcgactgccagcagcattgccagcgtgatcaataatttattt
aacgaacacgtaatggacgcgatcgatatgccgttggatattgacgtggcggagattggc
gaaaaggtcagcagttacgtgaaaaatcgccaaattaaccgggggctaattttaatggtt
gatatgggctccttggagggcattcaaaagttcattagcagtgagattgattttccgatt
gccattgttaacaatgtctcaactcagtcagcgttgctagtggccgatgatattcggcat
cataaagatattgagcaaatcatgcgaaacgttcggcaggcgatggtgcctaaaacgcaa
attatctatccaaaagaaattaagcgcaatctaatcgtaacctgctgctttaccgggatt
gggacggctaatagtgtcaaaaaactgttgttagatagcatgccggcagaagtggactgt
caaattcaggcctacgaggttgaccggttaaaggcggaagaacaaatcgccattttcaat
aagttgtacaacgtggtggcggtagtggggacgattgaccccgggcttcccgacgcccca
tacatttccttggaaagcattatttccggaagcgagatggagaagttggataaggctttg
caagtatgcatgactacggagcagctccaacagtttaaagaacaactgattcacagtttt
tcattagagcgggtaattaattccattaccattttggatgcgcatttggtgatggacaat
attgatcgcgccattaataaatttaaccagttaagcgggcaccagttaggcaacatcaca
aaaatgtcgttatacgtgcatgtgagctgcctaattgagcgattaatccgaaacgaaccg
attaccagctatgatttagaacaactttccgacactgaagaccaacggctttttaaatgg
ataaaagagtcttttagtgtgattgaaaaaatttatagtgtcgaaatcccagcctccgaa
tacggctatattttcgacattatccaagcagatgcctaa
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