Paenibacillus sp. CAA11: DCC85_00605
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Entry
DCC85_00605 CDS
T10401
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DCC85_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacl03021
]
DCC85_00605
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_00605
Transcription machinery [BR:
pacl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DCC85_00605
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DCC85_00605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
RPAP1_N
TatD_DNase
MetOD2
Mnd1
Motif
Other DBs
NCBI-ProteinID:
AWB42884
UniProt:
A0A2S0U511
LinkDB
All DBs
Position
126294..126854
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AA seq
186 aa
AA seq
DB search
MSSSLNLKIDPEKVNEIPMVDLAFMVLKAANTPYYYRDLMNEVAKLRGMSEEEINEAIAQ
LYTEINIDGRFACVGTNLWGLKRWYPVNSSEDPIASSKRPRIINDEDDDDDIEDFTDEED
TYTSDDDEDYDAMDEDGDDDLFSDDDDDADVEVDDDGLLDDEEIDEEDSEDEDSNDGDYD
EESKED
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagctcgctcaatttgaaaatcgacccggagaaggttaacgagattcccatggtc
gatttggcctttatggtactgaaagcagccaacaccccttactactaccgtgatttgatg
aatgaagtagctaagcttcgggggatgtcggaagaggaaattaacgaagccattgcccag
ttatatacagagatcaatatcgacggacggtttgcctgtgttggaaccaatctgtggggg
ttgaagcgctggtatccggttaacagttcggaggacccaatcgcaagctccaagcgtccg
cgcattatcaatgatgaagacgatgatgacgacatcgaagatttcaccgatgaagaggat
acttatacctccgatgacgatgaggactacgatgcaatggatgaagacggcgatgacgac
ctgttctccgatgatgacgacgacgccgacgtagaagtagatgatgacggcttgctcgat
gatgaagagattgacgaagaggattcggaagacgaagattccaacgacggagactacgac
gaagaatctaaggaagactga
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