Paenibacillus sp. CAA11: DCC85_04590
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Entry
DCC85_04590 CDS
T10401
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03030
DNA replication
pacl03430
Mismatch repair
pacl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCC85_04590
03430 Mismatch repair
DCC85_04590
03440 Homologous recombination
DCC85_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacl03032
]
DCC85_04590
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_04590
Enzymes [BR:
pacl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCC85_04590
DNA replication proteins [BR:
pacl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCC85_04590
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCC85_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
HCV_NS5a_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AWB43571
LinkDB
All DBs
Position
complement(1018746..1019639)
Genome browser
AA seq
297 aa
AA seq
DB search
MRNRSSVCAIGLVEVKDGQIVREFYSLINPQDSFDPFCTAIHGITADHVTDAPTFSELWP
TLRDWLASRPLVAHNASFDMSVLRSCIERMGLTFEGCSYLCSYLLSKRVWPGLPSYRLNH
MARHLKLDTFKHHDALEDARTAALLFLECLEASGSTECQDIADRFGYRLGMIHKDGSYQT
FTASRSSSSRKPQTLNLRATVDHFDPSHQLYEKNVVFTGTLGGMTRREAMQKVVDLGGRC
SDAVAEQTHYLVIGQKDYMKHLEGLKSSRKLQKAEKLAAMGYPVTVLPESDFLSLLG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaccgaagcagcgtgtgcgctatagggctggtcgaggtgaaggacggtcagatt
gtgcgggaattctattccctcatcaacccccaggacagcttcgatcctttctgtacggcc
attcatgggattacagcggatcatgtgacggacgcgcccaccttctctgagctctggcca
accttaagagattggcttgcatcacggcctcttgttgcccacaacgcctccttcgatatg
agcgtgcttcgaagctgtatagaacggatgggccttaccttcgaggggtgcagctatctc
tgctcctatcttctgtccaagcgggtttggcctgggcttcccagctatcggctgaaccat
atggcaagacatcttaagctggataccttcaagcatcacgatgcactggaagatgcaaga
acggcagccctgctctttctcgaatgcctggaggcttccggcagcacagaatgccaagac
atcgcagaccgcttcggatataggctggggatgattcacaaggatggctcctaccagacc
tttaccgcctcccgctcttccagcagcagaaagccgcagaccttgaaccttcgcgctact
gtggatcatttcgaccccagccaccagctttatgagaagaacgtcgtatttacaggcacg
ctgggcggcatgacccgtcgcgaggcgatgcagaaggtcgttgacttgggcggacgctgc
agcgatgcagtcgcagaacagacacactacctcgtcatcgggcagaaggattacatgaag
cacttagaaggacttaagagcagccggaagcttcaaaaggcggagaagctggcagccatg
gggtatccggtcaccgtgctgcccgaatctgatttccttagcctgctggggtaa
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