Paenibacillus sp. CAA11: DCC85_05515
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Entry
DCC85_05515 CDS
T10401
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCC85_05515 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_05515 (xth)
Enzymes [BR:
pacl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DCC85_05515 (xth)
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DCC85_05515 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AWB43729
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Position
1208093..1208857
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AA seq
254 aa
AA seq
DB search
MKLVSWNVNGLRACVNKGFNEYFREVDADIFCIQETKLQEGQIVMELGENYELYWNCAEK
KGYSGTAVFTRKKPIAVSLGMDGVEDPEGRVITLEFAGFYLVNVYSPNARRDLSRLDYRL
EWEDQFRSYVVDLDRRKPVMICGDMNVAHQEIDLKNPKSNRGNSGFTAEEREKMTQLQAS
GFIDTFRHFYPDQTDAYTWWSYMAKVRERNIGWRIDYFLASEALAPNLEDSRIDTQIMGS
DHCPVVLTVSDALS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtatcttggaatgtgaacggcttgagagcttgtgttaataaagggttcaat
gagtatttcagagaggtggatgcagatatcttctgcattcaggagacgaagctgcaggaa
ggtcaaattgtgatggagcttggggagaactacgagctttactggaactgtgccgagaag
aagggatactcaggaacggccgtgttcacccggaagaagcctatagcggtaagtcttggt
atggatggagtggaagaccccgagggaagggtcattacactggaatttgcaggcttttac
cttgtcaatgtgtattcgcctaatgcccgccgtgatctgtcgagattggactacagactg
gagtgggaggaccagttccgttcctacgtggtggacctagatagacgcaagcctgtcatg
atctgcggggatatgaatgtcgctcatcaggagattgatctgaagaatccgaaatccaac
cgggggaactccgggttcacggcagaggagcgggagaagatgacacagctgcaggcatca
ggctttatcgacaccttccgccacttttatccggatcagacggacgcctatacgtggtgg
tcttatatggctaaggtcagggagcggaatatcggctggcgcattgattattttctggct
tctgaagctttggcgcccaacttggaggattcacggattgatactcaaatcatgggcagt
gatcattgcccggttgtacttactgtatcggatgccctatcgtaa
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