Paenibacillus sp. CAA11: DCC85_08540
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Entry
DCC85_08540 CDS
T10401
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pacl Paenibacillus sp. CAA11
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DCC85_08540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacl03019
]
DCC85_08540
03009 Ribosome biogenesis [BR:
pacl03009
]
DCC85_08540
03036 Chromosome and associated proteins [BR:
pacl03036
]
DCC85_08540
Enzymes [BR:
pacl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DCC85_08540
Messenger RNA biogenesis [BR:
pacl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCC85_08540
Ribosome biogenesis [BR:
pacl03009
]
Eukaryotic type
90S particles
RNase
DCC85_08540
Prokaryotic type
rRNA processing factors
DCC85_08540
Chromosome and associated proteins [BR:
pacl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DCC85_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
AWB44259
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All DBs
Position
1810238..1810933
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AA seq
231 aa
AA seq
DB search
MSGDLKQLQHKLQIQFHDRQLLKQAFTHASYVNEHRFSQHSDNERLEFLGDAVLELTVSE
YLYRLFPDRPEGELTKLRASIVCEPSLVKFAEGLDFGQYVLLGKGEELTGGRTRPALLAD
VFESFIGALYLDQGLDQVIEFLNRNIFPQLVLNGKMQITDYKTELQELTQHHNLGVLEYR
IVEERGPAHEREFVSEVYMEGRRLGRGAGRSKKEAEQQAAAVALEELRAAE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttgagtggagatctgaagcagttacagcacaaacttcaaattcaatttcatgaccggcag
ttgttaaagcaagctttcacccacgcttcttatgtgaatgagcatcgcttcagtcagcac
tctgataacgagcgtctggagttcctaggagatgcggtgctggagcttacggtttcggaa
tatttgtatcgcctatttcccgatcggccagaaggtgagctgaccaagcttcgggcttct
atcgtctgtgagccttcgctggtaaaatttgccgaaggtcttgattttgggcaatatgtg
cttctgggtaaaggggaagaactgactggaggacggacccgtccagcgttgctggcggat
gtgtttgaatcttttattggtgctctctatctggaccagggccttgatcaggtgattgaa
ttcttaaatcgtaatatattcccacagctcgtcttgaacggcaaaatgcagatcacggat
tataagactgaactgcaggagctgacgcagcatcacaatttaggggtgctggaatatcga
attgtggaagaacgtggaccggcgcatgaacgtgagttcgtgtccgaagtatatatggaa
ggccgcaggctaggcaggggcgccgggcgctctaagaaggaagcagagcagcaggctgct
gcagtagcacttgaggagcttcgggcagcagaataa
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