Paenibacillus sp. CAA11: DCC85_09000
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Entry
DCC85_09000 CDS
T10401
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCC85_09000 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacl03019
]
DCC85_09000 (pnp)
03016 Transfer RNA biogenesis [BR:
pacl03016
]
DCC85_09000 (pnp)
Enzymes [BR:
pacl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DCC85_09000 (pnp)
Messenger RNA biogenesis [BR:
pacl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DCC85_09000 (pnp)
Transfer RNA biogenesis [BR:
pacl03016
]
Prokaryotic type
tRNA degradation factors
DCC85_09000 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
OB_PDCD11
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
AWB44347
LinkDB
All DBs
Position
1898067..1900166
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AA seq
699 aa
AA seq
DB search
MEKHVKMELGGRPLVLETGRLAKQANAAVMVRYGETSVLCTVTASSEPKDLDFFPLTVNY
EEKLYAVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNDVQIVNLVMSVDQD
CSPEIAAMIGTSAALSISDVPFDGPIGGVAVGRVNGEFVINPDIAQQEVSDIYLVVAGTK
DAIMMVEAEANEVPEEVMLEAIMFGHDEIKKIVATIEELVQIAGKEKMEVKLHAVDAEVN
REVRAFAAERLVEAVKIAEKHARQDAIDVINDETVAFFEQKYIESPELLSDVKEVLHDIV
KEEVRRLITHDKVRPDGRKLDEIRPIECDISLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGIHPEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPPESEF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDEEHVSILTDI
QGMEDHLGDMDFKVAGTKEGVTAIQMDIKIAGIDRQILNDALTQAREGRMHILSKMTEVI
EKPKESLSQYAPKILIMNINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
QEMNEKARSIIEGIVKEVVVGEIYTGTVKRIEKFGAFVEILPGKDGLVHISQISTERVGK
VEDVLAIGDVITVKVTEIDQQGRVNLSRKAVLTPEAPEK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacatgtaaaaatggagctgggaggcagacctttagtgcttgaaaccggccgt
ttggcaaaacaagccaacgcagccgtgatggtacgctatggagaaacctctgtactgtgt
acagttaccgcatcttcagagcctaaagatctggatttcttcccgctaaccgttaactat
gaagagaagctgtacgctgtaggtaaaattcctggcggattcattaagcgtgaaggccgt
ccaagtgagaaggccattcttgccagccgtctgacagaccgtccgattcgcccgctgttc
ccggaaggcttccggaatgacgttcaaatcgttaacctggtgatgagcgttgatcaagat
tgctctccagagattgctgctatgattggtacctctgcggcgctgagtatttcagatgtt
ccgtttgacggacctattggcggcgttgccgtagggcgcgtgaacggtgaatttgtcatc
aacccggatattgcacagcaggaagtcagcgatatctacctggtcgttgccggtaccaaa
gacgcgatcatgatggtagaagctgaggcgaacgaagttcctgaggaagttatgctggaa
gcgattatgttcggccatgatgaaatcaagaaaatcgtagccaccattgaagagcttgta
cagatcgccggcaaagagaagatggaagtaaagcttcatgctgtagatgctgaggttaat
cgcgaggttcgcgcatttgctgcagagcgtctggtagaagccgtgaagattgctgagaag
catgcacgacaagatgcaattgacgtgattaatgatgagactgtggccttctttgagcag
aagtacatagaatcaccagagctccttagcgatgtgaaagaagttctgcatgatatcgtc
aaagaagaagtacgccgcttgattacgcatgacaaagtgcgccctgatggccgtaaattg
gacgaaatccgtccgatcgaatgcgatatcagcctgctcccgcgcacacatggctcaggc
ttgttcacccgtggacaaactcaagcactcagcgtatgtacactcggtgctcttggcgat
gttcaaattctggatggcatccaccctgaagaaaccaagcgctttatgcatcactataac
ttcccgccgttcagcgtaggtgaagctcgcccgcttcgtgctccaggacgtcgcgagatc
ggtcacggtgcgctcggagagagagccttgtccaaggtcattccaccggagtctgaattc
ccttacaccattcgtctggtatctgaagttttagaatcgaacggttccacttcgcaggca
agtatttgcgcaagcaccttggcgatgatggatgctggtgtaccgattaaagcacctgta
gccggagtagcgatgggtctgattaaggacgaggagcatgtatctatcctgacagatatt
caaggtatggaagatcacttgggggatatggactttaaggttgctggcacgaaggaaggc
gtaaccgcaatccaaatggatatcaaaatcgctggcattgatcgtcaaatcctgaatgat
gcacttacccaagcacgtgaaggaagaatgcacattctctctaagatgacagaagtgatc
gagaagccgaaggaatctctttcacagtatgcgcctaagattctgatcatgaatattaac
ccggacaaaatccgtgatgtcattggtgcaggcggaaagatcatcaataagattattgaa
gaaaccggtgttaagattgatattgagcaggacggccgcgtgtttatcgcttcttcgaac
caggagatgaatgagaaggcccgctctattattgaagggattgtcaaagaagtggttgtc
ggtgaaatctataccgggaccgttaaacgtattgagaaatttggtgcatttgttgaaatc
cttccaggcaaggatggcctcgtgcatatttcgcaaatctctacggaacgcgtaggcaaa
gtggaagatgtactggctattggtgatgtgattacagtaaaggtaacggaaatcgaccag
cagggacgggtcaatctttcccgcaaggcggttcttaccccagaggcacctgagaaataa
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