Paenibacillus sp. CAA11: DCC85_13645
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Entry
DCC85_13645 CDS
T10401
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCC85_13645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_13645
Enzymes [BR:
pacl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC85_13645
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCC85_13645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
Zn_ribbon_6
PIF1
Flavi_DEAD
Helicase_C_2
Zn_ribbon_ISL3
Zn_Ribbon_TF
AAA_19
SLFN-g3_helicase
DAP3
HypA
Motif
Other DBs
NCBI-ProteinID:
AWB45166
UniProt:
A0A2S0UBF9
LinkDB
All DBs
Position
complement(2934051..2936567)
Genome browser
AA seq
838 aa
AA seq
DB search
MNRIAKVIVDVPSRDTDRPFDYLIPPHMAEWIEVGSRVGVPFGRRTVQGFVVALAGESEM
ALSKIKPIQELLDHLPPLPPDLVELAGWMSRQYACTLTSVLQVMIPSALKGKAERYIRVA
EDPADEDTLFTAADVLTRPEADIMDYIRASGPVTLAHLSQRYPDGGHLIKTLLGRGLLLE
SQAIKDKLKIKTVKTVSAAVQGEQAEQALASFTKQARRQKEVLAFLLEVGIPISMQEVLT
TLGVTAGTVKKLAEKGYAIIDDVEVYRDPYQDRRFKATEPLALTEEQQEVYHQIMAVLDA
HTHASFLLHGVTGSGKTEVYLQVIERCIGLGRQAIVLVPEISLTPQMVERFKGRFGARVA
ILHSRLSGGERYDEWRKIREGRVQVAIGARSAIFAPFSDLGLIVMDEEHETSYKQEETPK
YHARDVAIQRAKQHQAAVILGSATPSLESYHAARSQSNPLYAPMLLEMRQRPLGSQLPKV
NIVDMRNELKDGNRSMFSRSLHAAISARLERGEQSVLFLNRRGHSTFVMCRSCGYVATCP
ECDISLTYHQKSNNLRCHYCGYAAPAPSICPECGSEHIRYFGTGTQRVEGELAKLFPGIR
VIRMDVDTTSEKGAHERLLQAFRDKKGDVLLGTQMVAKGLDFPDVTLVGAIAADSSLNFP
DFRAAEKTFQLLTQVAGRAGRHQLPGEVFIQSYTPDHYSIVHASQHDYLSFVREELKHRR
ALGYPPYCRLILITLSHEQLPVLVRMAENFTSELRGRAQRKGWFASLDKFTAEALDVLGP
IASPMPRLKNRYRFQCMVKFRGELDAVGLVRQTTAEMLAGTKDSLFQISIDVDPQMLM
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtatcgcaaaggtgatcgttgacgtgcctagccgggacacggatcgcccgttt
gattacctgatcccccctcatatggcggagtggattgaagtgggcagccgggttggcgtg
ccgtttggacgccgcacggttcaaggctttgtagttgctcttgcgggggagtcggagatg
gccctttccaaaatcaagccgattcaggagcttctggatcatctccctcccttgccgccg
gatttggtggagctcgcgggatggatgagccggcagtacgcttgcactctgacgtctgtt
cttcaggttatgattccttcagccttgaaggggaaggccgaacgctatatccgggttgct
gaagacccagcggatgaggataccttatttacagcagccgatgtgctcacacggccagag
gctgacattatggattatatccgcgcttctggaccggtaacgctggctcatttgagccag
cgttatcctgacgggggtcatttgatcaagacgctgcttggccgggggctgcttctggag
agccaggccattaaagataagttgaagatcaagacggtgaagacggtatccgctgccgtg
cagggagaacaggcggagcaggcgctcgcttcctttaccaagcaggccagaaggcagaag
gaagtgcttgcctttctgctggaggtaggcattcccatctcgatgcaggaagtgctgact
acgcttggagtgacggcggggacagtgaagaaattagcggaaaaaggctatgctattatc
gatgatgttgaggtgtaccgcgatccttaccaggaccggaggtttaaagcgacggagcct
ttagcgcttactgaagaacagcaggaggtctatcatcagataatggcagtgttggatgct
catacccacgcctcttttctgcttcatggagttactgggagcggaaagacagaggtatat
ctgcaggtcatagaacgctgcattggccttggcagacaagccattgtccttgtgccggaa
atttcactaactccgcagatggttgagcggtttaaggggcgctttggcgcaagggtcgcc
attcttcacagccggttatccggtggggaacggtatgatgagtggcgcaaaatccgtgag
ggtagggtgcaggtggctataggcgcaagatcggctatattcgctccattctcggatctt
ggcctaatcgtgatggatgaagagcatgaaacctcctataagcaggaggagacgcctaaa
tatcatgcgagagacgttgccattcagcgggctaagcagcatcaggcagctgtcattctg
gggtcggctacgccttcgctcgaaagctatcatgcagctagatcccaatcgaatccgctt
tatgctccgatgctgctggagatgcggcagcggccgcttggcagccagcttccgaaggtg
aatatcgtggacatgcgcaatgagcttaaggatggcaaccgatctatgttcagcagatcg
ctccatgcggcgatttcagctaggcttgagcgcggggagcagtccgttctgttcttgaac
cgccgtggacattcgaccttcgtgatgtgccgcagctgcgggtatgtagctacctgtccg
gagtgcgatatatcgctgacttatcatcagaaatccaataatttacgctgccattattgc
gggtacgcggcacctgcgccttctatttgcccggaatgcggcagtgagcatatccggtat
ttcggaaccggcacacagcgtgtagagggcgagctggccaagctgtttccggggatccgc
gttattcgtatggatgtggatacgaccagtgaaaaaggagcgcatgaacgtttgctccag
gcctttcgggataagaaaggggacgtcctgctgggcacgcagatggtagccaaggggctg
gactttccggatgtgacacttgttggggccatcgccgcggattcgtccttgaatttccca
gattttcgggcagcggagaagacctttcagctgttgacccaggtggccggccgagccgga
cgccatcagctgcccggggaggtgttcattcagtcctataccccggatcattactcgatt
gttcatgccagtcagcatgattatctctcttttgtccgggaagagctgaagcaccggaga
gcgctgggatatccgccatattgccgcttgatattgatcacactgtcccatgagcagctt
cctgtgcttgtccggatggcggagaactttacaagtgagctgcggggcagagctcagcgc
aaaggatggttcgccagcttggacaagtttactgctgaagcgctggacgtgctaggtcca
atcgcttcaccgatgcctcgtctgaagaaccgttatcggtttcaatgcatggtgaagttt
cggggggagctggatgccgttgggcttgtccggcagactacggcagagatgctggcggga
accaaggattcattgttccaaatcagcattgatgttgacccgcagatgcttatgtag
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