Paenibacillus sp. CAA11: DCC85_15015
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Entry
DCC85_15015 CDS
T10401
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCC85_15015 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_15015 (recO)
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DCC85_15015 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DCC85_15015 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
ArfGap
ADD_DNMT3
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AWB45400
LinkDB
All DBs
Position
complement(3195301..3196047)
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AA seq
248 aa
AA seq
DB search
MLYRVEGIVIRSMDYGEGNKIITLCTEESGKVGVLVRGAKKSKSRHAALTQPFTYGQYVF
FRNTGLGTLNAGEIIESHHALREDLVLAAYASYACELLDRILQDEEVGSFWFSQLKACLE
ALDGGKDPQIVIHLFEMKMLQAAGYGPELEACVSCGSGEETEWFSPQLGGILCRRCKHHD
PAAMKPSQTAMKLLRLFGRLDLRRLGNVEVKDATKTELKAIMRALMDVQLGIPLKSRNFL
DQLDKYQI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctatacagagttgaaggaattgttatacggagcatggattatggggaaggcaataag
attatcacactttgtacagaagaaagcggcaaagtgggagtgctcgtccggggagccaaa
aagtcgaaaagccgtcatgctgcgttaacccagccgtttacttacggccaatatgttttt
tttaggaacactggattaggcacgctgaatgctggagagattatcgaatcacatcatgct
cttcgtgaggatttagttttagctgcctatgcatcttatgcctgcgagctgctggaccgg
atcttgcaggatgaagaggtcggctcattttggttcagccagctgaaagcgtgcctggaa
gcattagacggaggcaaagacccgcagattgttattcatttattcgagatgaagatgctt
caggcagcgggatatggcccagagcttgaggcttgtgtctcctgcggaagcggtgaggag
acagaatggttcagcccgcagctaggcggcattctatgcagacggtgtaaacatcacgat
cccgccgcaatgaaaccatcccagacggccatgaagctgcttagactgtttggtcgtctg
gaccttaggcggcttggcaacgttgaagtcaaagatgcaaccaaaacggagcttaaagct
atcatgcgggcactcatggatgtgcagctaggtatcccgctcaaatccaggaacttcctg
gatcagctagacaaatatcaaatttga
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