Paenibacillus sp. CAA11: DCC85_15080
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Entry
DCC85_15080 CDS
T10401
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pacl Paenibacillus sp. CAA11
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_15080
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCC85_15080
Archaeal homologous recombinant proteins
DCC85_15080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
VapB
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
AWB45412
LinkDB
All DBs
Position
complement(3205142..3208564)
Genome browser
AA seq
1140 aa
AA seq
DB search
MKPIHLKLSGLQSYREAQEIDFTELCETGLFGIFGPTGSGKSTLLDAITLSLYGKVERAY
GGTQGIMNHSEDSLFVSFTFELMSAAGVERYRVERRFKRTGDHSVSNTISRFIAVKPEGE
EVLADKLAEVTRCVEDKIGLKMDDFTRAVVLPQGKFAEFLALKGSERRQMLQRLFHLEKY
GDLLGQKLSRRVKETEGRLKELAAEQQGLGSASEEALQAAEERMQDAVKQAAAARLELQA
AQTAAEELGRLRELVLQQRQLAAEEAQLQQRSPDIAAEESRLKQAMAAEAMRPALTAWKA
AAQVAAEREAAAQRAAAAAEASAAQAQRAADAALLAESVLTAEEPGLLRRLEHLEQAKQL
QVELKALQQEQAAHAASHAGGQKRRQELAAEAAKEEQLLAKAMHRRQELEAKLKSCEVKA
ADRRRLQDAVARKDALTAQEQQLQLALKEEQAQQERSLSSHALAEKLSRQEAELASSQQH
MLDTALTAGMRLRQLDADLLQLLEQLELKEAGLREQMAASERHIWSVKLAEQLQTGEACP
VCGSVHHPAPAASLPHEAGLADTELGQLNNLLPELRELRYEAARGAEAVRGLAEALGKNA
DLEAVSSEAEAAAAQERHLPIAGDAPLAIAEARGRVTGIQQALKVSGTALAQLQREVKQY
QDRRDAWRQESAAAAAERRSVSQQSELMTRKREAVQQEYEAKIQEWEELFPNLSLEAAAL
EFEKLHAMDTEAEDVRSRLELSVPFIEEKNAKLRSLQEEMAELDRELVQWATRLEGGDKL
LQEKLQRLETITSGRSAEQLFAEASDKLDALRKEAKGTRDRQREADTARQETMQAALLAR
QAAHTAAEQTEQLLERWQAELEQSPFTSEEDASAALLEKGVMEAMELRIGQHRDAEQELR
IRLREITARLEGRTVSEEEWSLIQQQLQVCKLRDEVALEGKAKAERDWEDIKVRHLRWKE
LETVRAELDHQSGLLAKLQSSLRGNAFVEYVAEEQLMSVSHAASQRLRSLTKQRYSLETD
SGGGFVICDDANGGIKRPVSTLSGGETFLTSLALALALSAQIQLRGQYPLQFFFLDEGFG
TLDPDLLDTVITSLEHLHHDHLAVGVISHVAELRARLPRKLVVIPAESAGQGSRVELEKL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaattcatttgaagctgtctggactgcagagctaccgggaagcgcaggagatt
gatttcacggagctatgcgagacggggctgttcggaatttttggacctacgggaagcggc
aagtccacgctgctggatgctataactctatccttatacggcaaggtagaacgtgcttat
ggcggcactcaaggaattatgaatcattctgaggattctctgtttgtctcgtttaccttt
gagcttatgtctgccgcaggagtggagcggtaccgggtcgagcgccgattcaaacgtaca
ggggatcactctgttagcaatacgatcagcaggtttattgccgttaagccggaaggggaa
gaggtgcttgctgacaagctggccgaagttacccgctgtgtagaagataagattgggctc
aagatggatgactttacgagggccgttgtgctgccacaggggaaatttgcggaattcctg
gctttgaagggcagtgaaagacggcagatgctgcagcgcttgtttcatctggagaaatac
ggtgatttgctggggcagaagcttagccggcgcgtgaaggaaacagagggacggctcaag
gagctggcggctgagcagcagggcctgggcagtgcctccgaagaagcgctgcaggcggcg
gaagagcgaatgcaggacgctgtgaagcaagccgccgccgctcgtctggagctccaggcc
gcccaaacggcggcagaggagctcgggcgcctgcgcgagctcgtgctgcagcagcggcag
ctggcggcggaagaagcgcagctgcagcagcggagcccagacatcgctgccgaggagtcc
cgcctgaagcaggcgatggctgccgaggcgatgcgcccggcccttaccgcctggaaggcg
gccgcccaggttgcggctgagcgggaagccgcagcgcagcgtgccgccgccgccgctgaa
gcaagcgcggctcaggcgcagcgtgccgctgacgccgccctgcttgccgaaagcgtgctg
acggctgaggagcccgggctgctgcggcggctcgaacatctggagcaggcgaagcagctc
caggtggagcttaaggcgctgcagcaggagcaggcagcgcatgcggccagccatgccggc
ggccagaagcgccggcaggaactcgcagcggaggccgcgaaggaggagcagctccttgcc
aaggcgatgcaccggcgccaggagctggaggctaagctgaagagctgcgaggtgaaggcg
gcggatcgccgccgccttcaggatgctgtggcgcgtaaggatgcgctcacagctcaggag
cagcagcttcagctggcgcttaaggaagagcaggcgcagcaggagcgaagcctgagcagt
catgctctggcggagaagctttcaaggcaggaagccgaactcgcatcaagccagcagcac
atgctggatacggctttgacggcaggaatgaggctgaggcaactggacgccgatttgctg
cagcttcttgaacaattggagctcaaggaagcagggcttagggagcaaatggcggccagt
gagcgccatatctggtctgtgaagcttgcggagcagctgcagacgggtgaagcctgtcct
gtctgcggatcggtacaccatcctgccccggcagcaagcctgccgcatgaagcggggctt
gcggacacagagctaggccagcttaacaacctgctgccagagcttcgggagctgcgctat
gaggcagcaagaggtgcagaggctgttcgcggtcttgccgaagcgctgggtaagaatgct
gatctggaagccgtgtcaagtgaagccgaggctgctgcggcgcaggagagacatctgcct
atagctggcgatgcgcctcttgcgattgctgaagctcggggacgcgtcaccggcatccag
caggcgcttaaggtcagcgggacggctcttgctcagcttcagcgtgaagtgaagcagtac
caagaccgccgggatgcatggcggcaggaatctgcggcagctgcggcagagcggcgcagt
gtgagtcagcaaagcgagctgatgactcgcaaacgcgaagcggttcagcaggaatatgag
gccaaaatacaggagtgggaagagctatttcccaaccttagcttggaggcagcagctctg
gagtttgagaagctgcatgctatggataccgaagcggaagatgtgcgcagccggcttgag
ctcagcgtcccgttcattgaggagaagaatgcgaagctgcgctctctccaagaggaaatg
gcagagctggaccgggagctggtccaatgggcgacaaggcttgaaggtggggacaagctg
ctgcaggagaagctgcagcggcttgagacgattacctccggccgttcggcggaacagcta
tttgccgaagcgagtgacaagctggatgctctgcggaaggaagccaaagggactcgcgat
cgacaaagagaagctgatacggcgagacaagagacgatgcaggcggcccttctggctcgt
caggcagctcatacggctgcagaacaaacggagcagctgctggagcgatggcaggctgag
cttgaacagtcgcccttcacgagcgaagaggatgcgtcagccgcccttctggagaaggga
gttatggaagcgatggagctgcggattgggcagcaccgggatgcggaacaagagctccgg
attcggcttcgggaaatcaccgcccgcctggagggaagaactgtttccgaagaagagtgg
tctcttattcagcagcagcttcaggtatgcaagctaagagatgaggtagccctggaaggg
aaggctaaggcggaaagagactgggaggatatcaaggttcgacaccttcgctggaaggag
ctagagactgttcgggcggagctggaccatcaatccggcctccttgctaagctgcagagc
agcctgcgcgggaatgccttcgtggagtatgtagctgaagagcagttaatgagcgtaagt
catgcggcttctcagcgtctgcgctccctgaccaaacagagatactcgctggagaccgat
tccggcggaggatttgtgatctgtgatgatgccaatgggggcattaagcgtccggtctcc
acgctttcgggtggagagacgttcttgacctctttggcgctggcgctggcgctttcggct
cagattcagctgcggggtcagtatccgcttcagttcttctttttggacgagggctttggc
acacttgatcccgatctgcttgatacggtgatcacttctctggagcatttgcatcatgat
catttggcagtaggcgtgatcagccatgtggctgagctgcgtgcgcgccttccgcgaaag
ctggttgttattccggcagagagcgctggacaaggctcgcgagttgaattggaaaaattg
taa
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