Paenibacillus sp. CAA11: DCC85_15090
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Entry
DCC85_15090 CDS
T10401
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pacl Paenibacillus sp. CAA11
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_15090 (addA)
Enzymes [BR:
pacl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC85_15090 (addA)
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DCC85_15090 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWB45414
LinkDB
All DBs
Position
complement(3209836..3213843)
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AA seq
1335 aa
AA seq
DB search
MELVKPVGTHWSDDQWKAIAMSGGNMLVAAAAGSGKTAVLVERIIRKITGASGGIDVDRL
LVATFTKAAAAEMRQRIREALEAELEKDPEHEHLRRQLAMLGRASITTLHSFCMEVIQRY
YTLIPLDPGFRIASEHETQLLRQEVLEELFEEKYGSESEGSSFLELVDWFSGERSDDAMF
YLVQRLYDFSRSHPWPDHWLRSTAAAFTAADTSSLEQSSWVKSIVSDTQLSLDGIIHLLK
QGIDLSLSPGGPAPYAVTLQEDLSMVLELKRAVEAGPWSSLHGQFEKAAFGKLKAVRKDQ
TDPAVQDRVKGFREEAKKSLAELRGQLFGRPAEAFITELHQAGPLMQELAELVISFGERY
QAEKKAKSWLDFSDLEHYCLQILRHPGSNPLQVLPSDAALEYQAQYEEVLLDEYQDTNTV
QEMIVQLISRPSPGNRFMVGDVKQSIYRFRLAEPGLFLDKYRSYADDFGGEGLRIDLARN
FRSRREVVSAVNMLFRQMMNRTVAEIDYDARAELVYGELFPQNEKGLPQYAPELLLMDRS
EGGRKPEETGGEAALEEEAPGEEAVEIEAVRLEARAIAARIRSLLGDDGRPLMVYDKRIK
ASRPARYGDIVILLRSVSAWAPLMIQELMLEGIPASGELNQGYFQATEVEIMLSLLQVID
NPQQDIPLASVLRSPIVGLTEEELAGVRLAASGSSFYEALVKAASGVGLDLDHEEEPNLT
HPSEGLEEADLSSVGDGDGELAGKLTIFLDRLEAWRTEARIGELSGLIWRVYRETGYLDW
VGGMPGGIQRQANLRALHDRAKQYERSAAAPGLFRFLRFIGRLKETGSDLGAPSTAGEDE
ESVRIMTIHKSKGLEFPVVFVAGLSKMFNRQDLNSPFLMHKELGFGPKYVDGVTRVSYPT
LPNLAIRRRAQMELLAEEMRILYVALTRPKDKLILVSAVKDLSKAAAVWSQALQSEQEML
PDYLLARGRSYLDWIGPALIRQPEAGKLRELAGIPAETSGLFIASGEESLPWKIVTLPLH
QIVQAAAVTKDEEKDSAGVEYASPVQRLLTGMGLPSVGDEDPALSERIRASLDWNYPYEI
SSRISAKTSVTEMKALLTMQEQPPLDAAEMEKIRQESQVLPEQADFKLHLRRPKFMERRQ
MTPTERGTAYHTVMQHLPFEGTPDQSAEELVQETIHRLVSLQILPASQAEELDNGRIADF
LRSPLGDMVRRATWVRRELPFSYGLSAVDAYPKFAPYLEGVQEGSISEVQLRTELDQEIV
LIQGIVDCLFELEGRQILLDYKSDRVLAHRGGISALKEQYRSQLELYAAALYDITGVPVE
EKWLYFFDTGEAVKL
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgtaaaaccggtcggaacccattggagcgatgatcagtggaaggcgattgcc
atgtccggcggaaatatgctcgttgccgctgctgcaggctctggtaagacggcggttctg
gttgaacggattatccgcaaaataaccggggcttcagggggcatagacgttgatcgcttg
ctggtagcaaccttcaccaaagcagcagctgccgagatgcgccagcgcatacgtgaggcg
ctggaggcggagcttgagaaggacccggagcatgaacatttgcgaagacagctagccatg
cttggacgcgcctccattacgacactgcattctttctgcatggaggtcattcagcggtat
tataccttgattccccttgatccgggatttcgcattgcctccgagcatgagacacagctg
ctgcggcaggaagtgttggaggagctgtttgaggaaaaatacggctccgagtcagaaggg
agttcattcctggagctggttgactggttcagcggggagcgaagcgatgatgcaatgttc
tacctggttcagcggctgtacgatttctcgcggagccatccttggccagatcactggttg
cgaagcacagcagcagcttttacagccgccgatacgtcttctttggagcaaagctcctgg
gtaaagagcattgtgtcggacacgcagctatccctggacggaattattcatctgctaaag
caggggatcgatttgtctctttctccggggggtcctgctccgtatgcggtcacgcttcaa
gaggatttgagcatggtgcttgagctgaagcgtgcggtggaggcaggtccttggtcttct
ctgcatggccagttcgagaaggcggcatttggcaagctgaaggctgttcgtaaggatcag
acagatccggcagttcaggatcgggttaaggggtttcgcgaagaggctaagaaatcgcta
gcagagcttcgaggtcagctatttggaaggcctgctgaggcattcattacagagctgcat
caggcaggtccgctgatgcaggagctggccgagcttgtgatcagtttcggtgaacgctat
caggctgagaagaaggcgaagagctggcttgatttctctgatctggagcattactgtctg
caaattctccgtcatcccggctcaaatcctttgcaggtgctcccatcggatgcggctctg
gaataccaggctcagtatgaagaagtgctgcttgacgagtatcaggatacgaatacggta
caggaaatgattgttcagttgatctctcggccttccccgggcaaccggtttatggttggg
gatgtgaagcagagtatttatcgcttcaggttggcagagccgggactgttcctggataaa
tatcgcagctatgcggatgattttggcggggaaggcctgcgaatcgacctggcgcgtaat
ttccgcagccggcgcgaggtggtaagcgccgttaatatgttgtttaggcagatgatgaac
cgaaccgttgctgagattgattatgatgccagagcagagcttgtctatggggagttattt
ccgcagaacgagaaggggcttccccagtatgcgccggaattactgctgatggaccgcagt
gaaggcggaagaaagccggaagagaccggaggagaagctgcccttgaagaagaggcgcct
ggtgaggaagcagtagagattgaagcggttcggcttgaggcgagagccattgctgctcga
attcgctcgcttctaggcgacgatggaagaccgcttatggtctatgacaagcgaatcaag
gcttcgcgtcccgcaaggtatggcgatattgtcatcctgcttcgctctgtctctgcatgg
gccccattaatgattcaagaactgatgctggaagggattcctgcctccggggagcttaat
cagggttatttccaagcgactgaagtggaaataatgctgtccttactgcaagtcattgac
aatccgcagcaagatataccgctagcctccgttcttcgttctccgatcgtaggtttgaca
gaggaagagctggcaggcgttcgtcttgctgcttccggaagcagcttctatgaagcgctt
gtgaaggctgcttcgggagtcggccttgatctggatcatgaggaggaaccgaaccttacg
catccaagcgagggtctggaggaagcggacttgagctcagttggcgatggagatggtgag
ctggcgggcaagctgactatttttttggaccgacttgaggcttggcgaaccgaagcgcgt
ataggtgagctaagcggacttatatggcgggtgtaccgggagacggggtacctggattgg
gttggaggtatgccgggagggattcagcggcaagccaaccttagagcactgcatgaccgg
gccaagcagtatgaacggtctgctgcggctcccggccttttccgcttcttgcgctttatc
ggaagactgaaggagacagggagtgatcttggtgccccgtctacggcaggtgaagatgaa
gagtcggttcggattatgacgattcacaaaagtaaggggctggagttcccggttgttttt
gtggccgggttatccaaaatgtttaataggcaggatttgaattcgccgttccttatgcac
aaggaacttggctttggtcctaaatatgtggatggggttacccgtgtaagctatccgaca
cttcccaatctggcgattcggcgcagggctcagatggagctgctcgccgaagagatgcgg
attctatatgtggcgctcactcgtccaaaagacaagctgattctggtatccgcagtgaag
gacttgagtaaggcggcggctgtatggagtcaggctttgcagagtgagcaggaaatgctg
cccgattatctgctggccagaggccgcagttatttggactggattgggccggctttaatt
agacagcctgaagctggcaagcttcgggaactggcgggcattcctgctgaaacctctggc
cttttcatagctagcggggaagagtctcttccttggaaaatcgttacgctgccacttcat
cagattgtgcaggctgcagccgtaaccaaggatgaagagaaggacagtgcaggtgtggaa
tatgcctcccctgttcagcgccttcttacaggaatggggcttccttcggtgggagatgag
gaccctgcattatccgagcgcataagagcctccctggattggaactatccttatgaaatt
tcaagccgaatttcggccaagacctcggtcactgagatgaaggcgctgctgactatgcag
gagcagcctccgctggatgctgccgagatggagaagattcggcaggagagccaggtgctg
ccggaacaggcggatttcaagctccatttgcgtcggccaaaatttatggagcgtagacag
atgacaccaacggagcggggaacagcttatcacacggtgatgcagcaccttcccttcgag
ggtacacctgaccaatcggcagaagagctggtgcaagagacaattcataggctcgtaagc
ctgcaaattctacccgcctcacaggctgaggagctagacaacggacggattgcggatttt
ttgcgaagtccactgggagatatggtgagacgagctacgtgggtccgcagagagctgcca
ttcagctacggcttgtccgcggtggacgcttatccgaaatttgccccttatctggagggt
gttcaggaaggtagcatatctgaggttcagctccggacagaattggatcaggagattgtg
ttgattcaagggattgtagattgtttgtttgagttggaaggccggcagattctgctggat
tacaagagcgaccgggtgctggcgcaccgtggtggcatttcagcgctgaaggagcagtac
cgcagccagcttgagctgtatgcggccgctctctacgacattacaggcgtgcctgtggag
gagaaatggctgtatttcttcgacaccggcgaagcagtaaagctatga
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