Paenibacillus sp. CAA11: DCC85_16350
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Entry
DCC85_16350 CDS
T10401
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pacl Paenibacillus sp. CAA11
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacl03019
]
DCC85_16350
Messenger RNA biogenesis [BR:
pacl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCC85_16350
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GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWB45610
UniProt:
A0A2S0UD15
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All DBs
Position
complement(3493576..3494532)
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AA seq
318 aa
AA seq
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MTLIKELKSQDEFVGFYLIKELEIKQTNATPPKDYLDLVLCDASGQLTAKLWDASSTDKE
SFFPMGLVKVRGIVQTYRERLQIKIIQMRPASDGDGVRLTDFVRSAPIGPDELIHAIQRV
IDSIADEEIRSLVNFCVTKVEDKLTHYPAAKTHHHAYFAGLAYHMVRMLELGEFLCKQRP
FLNADLLKAGIVLHDIAKPEEMIAQLGIVSEYSVPGKLIGHIAMASSWITEAAVRLNLEP
DSPKVMALQHLVLSHHNLGEWGSPVQPQTAEAVALHHIDAMDAKLQMVEDALNTTPDTEA
WTPFIRGLENKAIYRMKV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgacactgattaaggaattaaaaagccaggatgagttcgtcggcttctatctgatcaaa
gagctcgaaattaaacagaccaatgcaacacctcccaaggactaccttgatcttgtatta
tgtgatgccagcgggcagctgacagccaagctgtgggatgcttcgtctaccgataaagaa
agcttcttccccatgggactggtcaaggttcgggggattgtacagacataccgggaacgg
ctgcagatcaagatcattcagatgcgtcctgcgagtgatggagacggggttcgtcttacc
gattttgtaagatctgctccaattggcccggatgaactgatccacgcaatccagcgggtg
attgacagcattgccgatgaggaaatccgctcgctcgtcaatttttgcgtaaccaaggtg
gaggacaaactgacccattacccggctgcaaaaacacaccatcatgcctattttgccggc
ctggcctaccatatggtgcgcatgctagagcttggtgaatttctgtgcaagcagcggccg
ttcctgaatgccgatctgctcaaggcaggcatcgtgcttcatgatattgccaagcccgaa
gagatgatcgcccagcttggcatcgtgtccgaatacagcgttcctggcaagctgatcggc
catatcgctatggcttcaagctggattaccgaagcggccgtccgtctgaatcttgaaccg
gattcgcctaaagtcatggccttgcagcatttggtattgtcacatcacaacctgggggaa
tggggcagcccggttcaaccgcaaaccgcagaggcggtagctctgcaccatattgatgcg
atggatgctaagctgcagatggtagaagatgccctgaatacgacgccggatacggaggcg
tggacgccgttcatccgcgggctggagaacaaggcgatttaccggatgaaggtctaa
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