Paenibacillus sp. CAA11: DCC85_16845
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Entry
DCC85_16845 CDS
T10401
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCC85_16845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_16845
Enzymes [BR:
pacl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC85_16845
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCC85_16845
RecFOR pathway proteins
DCC85_16845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_22
nSTAND3
AAA_14
NB-ARC
RNA_helicase
NTPase_1
AAA_3
AAA_18
Sigma54_activat
Rad17
Resolvase
TsaE
AAA_2
Bac_DnaA
Sigma54_activ_2
AAA_24
DUF815
AAA_17
AAA_28
AAA_25
ABC_tran
NACHT
NPHP3_N
bpMoxR
IstB_IS21
AAA_33
ATPase_2
Parvo_NS1
Torsin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AWB47016
UniProt:
A0A2S0UGT3
LinkDB
All DBs
Position
complement(3610879..3611883)
Genome browser
AA seq
334 aa
AA seq
DB search
MDDRIISANLMMEDQAVELSLRPRYLAEYIGQNQIKENLKIYIEAAKMRKEALDHVLLYG
PPGLGKTTLANIIANELGVSLRTTSGPAIERPGDLAALLTNLQEGDVLFIDEIHRLHRTV
EEVLYPAMEDYALDIMIGKGPSARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVVSRLE
FYSVNELSYIVSRGADILGIEIIGDAAEEVALRSRGTPRIANRLLKRVRDFAQVRGDGMI
TPEIAKEALHMIQVDSMGLDQIDHKMLRAMITSFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFMQRTPRGRMVTPAAYQHLGLPMPEQR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccggatcatatcggcaaatttaatgatggaggatcaggcggttgagcttagc
ttgcggccccgctatttggcggaatatatcggacagaatcaaatcaaggaaaatttgaag
atatacatcgaagccgcgaagatgcgcaaagaggcactggatcatgtactgctctatggc
ccgccgggcctcggaaagaccacgctggccaacatcatagcgaacgagctaggagtaagc
ttgcggacgacttcgggaccggcgattgaacggccaggcgacttggcggccctgctgaca
aatttgcaggaaggcgatgtgctcttcattgatgaaatccaccgcttgcaccgcaccgta
gaagaggtgctttatccagcaatggaggactatgcgcttgatattatgatcggtaaagga
ccaagcgcgcgttccgtaagacttgatcttcctccgttcacattgattggagcaacgact
cgtgcaggattgctgtcagctccactgcgcgaccgctttggtgttgtaagtcggcttgaa
ttctattccgttaatgaactcagctacattgtctccagaggggcagatattctcgggatt
gagatcatcggggatgctgcggaagaggtggctcttcggtcacgcggtaccccgcggatt
gcgaaccggcttctcaagcgggtcagggattttgcccaagttcggggagatgggatgatt
acgcctgaaattgccaaagaagcactgcacatgattcaggtcgattccatggggttggat
caaatcgaccataaaatgctgcgagccatgattaccagctttcgcggtgggccggtgggc
cttgatactattgcagctacaattggagaagagagccagacgattgaagatgtttatgaa
ccttacctcttgcaaatcggctttatgcaaagaacgcccagaggaagaatggttactccg
gctgcataccagcatttgggccttcccatgccggaacagcgctaa
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