Paenibacillus sp. CAA11: DCC85_19680
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Entry
DCC85_19680 CDS
T10401
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pacl Paenibacillus sp. CAA11
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_19680
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DCC85_19680
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
DnaB_C
nSTAND_NTPase5
AAA_22
AAA_16
NTPase_1
RecA_N
nSTAND3
KdpD
AAA
NPHP3_N
AAA_14
AAA_24
ATPase_2
SLFN-g3_helicase
NACHT
AAA_5
DAP3
MeaB
KTI12
ArsA_ATPase
HypA
Fer4_NifH
Glyco_transf_N
AAA_31
DUF815
Motif
Other DBs
NCBI-ProteinID:
AWB46165
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Position
complement(4170832..4172199)
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AA seq
455 aa
AA seq
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MAKTKTKFYCTECGYESPKWYGKCPGCGTWNSMLEETESVVKTQGMTSGIFQSKEKPLPI
IDIESGKEPRVQTGIGELNRVLGGGVVPGSLVLVGGDPGIGKSTLLLQTSHELAKSGLKV
LYISGEESVKQTKLRAERLGALSPQLYVLCESSMERIEEAIESVSPDFLVIDSIQTVYLP
EITSAPGSVSQVRECTGRFMRIAKGQGIATVLVGHVTKEGAIAGPRMLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMNESGLREVANPSELFLSERPLGVAGSTVVASME
GTRPMLVELQALIASTHFPSPRRMGTGVDHHRMNLIIAVLEKRMGMFLQNQDAYVNVAGG
VRLDEPAVDLAIAVSIASSFRDMPTKPDDVIFGEVGLTGEVRAVSRAEQRVREAAKLGFK
RVILPEKSLKGWKSPKEIQVIGVNTVADALAVALN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacaaaaacgaagttttactgcacagaatgcgggtatgaatcccccaagtgg
tacggcaaatgtccgggatgcggaacatggaattccatgttggaggagacggagtcagtt
gttaagactcaggggatgacctcagggatattccaaagtaaagaaaaaccgcttcccatc
atagatatagaaagtggcaaggagccgagagtgcagactggaatcggagagcttaaccgc
gttctaggcggtggagtcgtaccgggctccctcgtgctcgtcggcggagatccgggcatc
ggtaaatccaccctgctgctccagacttcccatgagctggctaagtccggcctcaaggtc
ctttatatttcaggagaggaatctgtgaagcagacgaagcttcgtgcagagcggctcggc
gccttatccccgcaattgtatgtactgtgtgagagcagtatggagcggatcgaggaggct
atcgaaagtgtgtccccggactttttggtcatcgattcgattcagacggtgtacttaccg
gaaatcacaagcgcgccaggcagcgtttctcaggttagggaatgcacggggcgctttatg
cgcattgcgaaaggccagggaatcgctacagtgctggtcggccatgtgacaaaggaaggc
gccattgcgggcccgcggatgctggagcatatggtagattgtgtcctttatttcgaaggg
gaacggcatcatacgtatcggctgcttagagcggttaagaaccggtttggctctacgaac
gagatcgggatctttgagatgaacgagtccggacttcgggaagtagccaacccatcagag
ctttttctgtcggagagaccgctcggcgtagcggggtccactgttgttgcaagtatggaa
ggaacacggcctatgcttgttgagcttcaggctttgattgcatcaactcattttccttcg
cctagacgaatgggaacgggtgtggatcatcatcgcatgaatctgattattgctgttctt
gagaagcggatgggcatgtttttacagaatcaggacgcttatgtaaacgttgcaggcggt
gtccgtctagatgagcctgcggtggatctggcgattgcggttagcattgcctccagcttt
cgggatatgccgacaaagccggatgatgttatttttggagaagttgggcttactggtgaa
gtgcgcgcggtatccagggccgaacagcgggtgagggaagctgcaaagctcgggttcaaa
cgggttattttaccggagaagagcctcaaggggtggaagagcccaaaagaaattcaagta
atcggtgtaaacactgttgcagatgcgctagcggttgcgttaaattag
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