Paenibacillus sp. CAA11: DCC85_19740
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Entry
DCC85_19740 CDS
T10401
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03420
Nucleotide excision repair
pacl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCC85_19740 (pcrA)
03430 Mismatch repair
DCC85_19740 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_19740 (pcrA)
Enzymes [BR:
pacl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC85_19740 (pcrA)
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCC85_19740 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DCC85_19740 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Dak1
Cadherin_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWB46172
LinkDB
All DBs
Position
complement(4187416..4189731)
Genome browser
AA seq
771 aa
AA seq
DB search
MHFTMPVDIELAINKLNPQQKEAALTTEGPLLIMAGAGSGKTRVLTHRIAYIIASRKAPP
WSILAITFTNKAAREMQERVSSLVGPEGRDIWVSTFHSMCVRILRKDIERIGFTSNFSIL
DSTDQLSVVRNCMKDLNIDTKKFEPKAVQAIISNAKNELITPQQLEQKAADYFEGIAAKV
YTMYQKRLRNNNSLDFDDLIMKTIELFKTVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLC
QMLADSHRRLCVVGDSDQSIYRWRGADISNILNFEEDYPEAKTILLEQNYRSTSTILNAA
NEVIGQNTGRKAKKLWTDKGEGNKIKVYRGDSEHDEGYFVTSEIHKNIKEGKSYRDHAIL
YRTNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINV
PKRGLGDTTVAKLAAAAAERGTSIFRVLEVVDDLGFNTRTRNGLVEFYDMIAGLHRMVEF
LSVTELTEKMLEVTHYRLELERENTIESKARVENIDEFLSVTMEFEKNNEDKSLVSFLTD
LALIADIDSMNDEEDEDPSDAVILMTMHSAKGLEFPVVFIIGMEEGVFPHSRAFLDNEEL
EEERRLAYVGITRAEEQLFLTCAQMRTLFGRTTANPPSRFLSEIPDELKEDTDIARDRYR
RGSGHGGAYGGRGFGGGGSNFGGARREPSAPSAGRVTVTAGAPKTAAATAPISSPGELKA
GDKVSHGKWGIGTIVSIKGSGNDTELQIAFPAPVGVKRLLAGFAPITKVQE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcattttaccatgcctgttgacatagaattagcgattaacaagctcaaccctcagcaa
aaagaagcagccctgactacagagggccccttgctcattatggccggagcgggcagcggc
aagacccgggtgctgactcaccggatcgcgtatattatcgcgtcacgcaaggcgccgcca
tggagcattctggcgatcacctttacgaataaagctgcgcgcgagatgcaggaacgggtg
tcgagtctggttggacctgaaggcagggacatctgggtttctactttccactccatgtgt
gtgcggattcttcgtaaggatattgaacgcattgggtttacatcgaatttctcgattctt
gattcaaccgaccagctgtccgtggttcgtaactgtatgaaggatcttaatatcgatacg
aagaagtttgaacccaaggcagttcaagcgatcatcagcaacgctaagaacgaactgatt
accccccagcagcttgaacagaaggcggcggactattttgaaggcattgcagccaaagtg
tacaccatgtatcagaagcggctgagaaacaataactctcttgactttgacgatttgatt
atgaagacgattgaattgtttaagactgtgcctgaagtgctcgatttctatcaaaagaaa
ttcaaatatatccatgttgatgaataccaggatacgaaccgggcgcagtacatgctttgt
cagatgcttgcagacagccaccgccgcctatgcgtcgtcggggatagcgaccagtcgatt
tatcgctggcgcggagcggatatcagcaatattttgaattttgaagaggattaccctgag
gccaagacgatcctgctggagcagaactatcgctcgacctcaaccatcctgaatgcagcg
aatgaagtgattggccagaacacggggcgtaaagctaagaagctgtggacggacaaaggg
gaaggtaacaagatcaaggtttaccggggcgactcggagcatgacgaggggtattttgta
acctcggagattcacaagaacatcaaggagggcaagtcttaccgggatcatgccattttg
taccggacgaatgcccagtcccgggtgatcgaggaaattctgattaagtcggatatccct
taccagattgttggcggcattaagttctatgatcgcaaagaaatcaaagacctgctggcc
tatctgagactgttatctaacccggatgatgacatcagtctgacccggattatcaatgtg
cctaagcggggacttggggatacaaccgttgcaaagctggcggcagccgccgcagaacgg
ggaacctctatttttcgagtacttgaggtagtggacgatctgggcttcaacacgcgtacc
cgcaacggtctggttgagttctacgatatgatcgcaggccttcatcgtatggtggaattc
ttgtcggtgacagagctcacggagaagatgcttgaggtgacccattaccgtcttgagctt
gaacgtgagaatacgattgagtccaaagcaagggtggagaatatcgatgaatttctgtct
gtaacgatggaattcgagaagaataatgaggataagtcacttgtttccttcctcacggat
cttgccctgattgcggatatcgacagtatgaacgatgaagaggatgaggatccgtcggat
gctgtgatcttgatgaccatgcacagtgccaagggtctggaattcccggtcgtatttatc
atcggcatggaggagggcgtatttccgcacagccgtgcttttctggacaacgaggagctt
gaagaggaacgccggctggcttacgtgggaattacgcgggcggaggagcagctgttcctc
acctgtgcgcaaatgcgtaccttgtttggccgcacaacagccaacccgccttcacgcttc
cttagcgagattccggacgagctgaaggaggacacggatattgcccgcgatcgttaccgc
cggggatcaggtcatggcggcgcttatggaggccgcggctttggcggcgggggcagcaac
ttcggtggcgcacggcgagagccttcggctccctctgccgggcgtgtcaccgtcacggct
ggagcgccgaagacggcggcagcaacggctcccatttcttcccctggcgaactgaaggcc
ggcgacaaggtttcgcatggcaaatggggcataggcaccattgtgtccatcaagggctcc
ggtaacgatacggagctgcagattgcttttcccgcaccggtaggggttaagcggcttcta
gcaggtttcgcccctattactaaggttcaagagtaa
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