Paenibacillus sp. CAA11: DCC85_22100
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Entry
DCC85_22100 CDS
T10401
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCC85_22100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacl03400
]
DCC85_22100
Enzymes [BR:
pacl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DCC85_22100
DNA repair and recombination proteins [BR:
pacl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DCC85_22100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWB46595
LinkDB
All DBs
Position
complement(4742716..4743321)
Genome browser
AA seq
201 aa
AA seq
DB search
MDHSFVILPEEQTPKGIQHCELCELSRQRHRVIWGEGNPNAPLMLILDNPGAREDREGNS
FLCGTRETLQLGLREAGIEIDSVYVTYLLKCRPVRAYDKPTARAACFPHLQLQLGEKQPL
VLFGFGNVVAEALFPQQENISVKELRGSWQEFRGMPIGFTYHPLAVRRRPNLLRFFIDDL
AALKEKWRERAADKSSSNNHG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggatcattccttcgttattttgccagaagaacaaacccctaagggtattcagcactgt
gagctttgcgaactatccaggcagagacaccgcgtcatctggggtgaggggaacccgaat
gccccgctgatgctaattctggataatccgggggcacgagaggaccgggaggggaactca
tttctgtgcggtacccgggaaaccctccagctgggtttgagggaagcggggatagagata
gactcggtttatgtcacctacttgctcaaatgccgtccggtgcgtgcatacgataagccc
acagcaagagccgcatgttttccccatctgcagctgcagcttggtgagaagcagccgctt
gtactatttggatttggtaatgttgtggcagaggccctattcccgcagcaggagaatatc
agtgttaaggaattgcggggcagctggcaggagttcaggggcatgcctatcggctttacc
tatcatccgcttgctgtaagaaggcggcccaacttacttaggtttttcatagacgatttg
gcagctttgaaggaaaagtggagggaaagagcagcggataaaagcagctcaaacaaccat
ggatga
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