Cutibacterium acnes hdn-1: TIA1EST1_01050
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Entry
TIA1EST1_01050 CDS
T03470
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pacn
Cutibacterium acnes hdn-1
Pathway
pacn03030
DNA replication
pacn03430
Mismatch repair
pacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TIA1EST1_01050
03430 Mismatch repair
TIA1EST1_01050
03440 Homologous recombination
TIA1EST1_01050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacn03032
]
TIA1EST1_01050
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_01050
Enzymes [BR:
pacn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TIA1EST1_01050
DNA replication proteins [BR:
pacn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TIA1EST1_01050
DNA repair and recombination proteins [BR:
pacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TIA1EST1_01050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
Rad17
RuvB_N
AAA_30
AAA_14
AAA_5
AAA_18
AAA_16
nSTAND3
AAA_28
RNA_helicase
AAA_19
ABC_tran
TsaE
ORC-CDC6-like
SKI
Motif
Other DBs
NCBI-ProteinID:
AID35190
LinkDB
All DBs
Position
252881..255727
Genome browser
AA seq
948 aa
AA seq
DB search
MENEAVEPEVFEQDGPDLFGDEESPRPVMPPDEATPDDDLPSDPCDPGLLDGPETPEEPD
GLETDEDEEDGADVIERVQELIGEAPDSNPDDDLPELPLALYRRYRPETFDEVIGEDHVI
EPLKRAILNNRVNHAYLFSGPRGCGKTTTARILARALNCEQGPTPTPCGTCQSCRDLACG
GPGSIDVIEIDAASHGGVDDARDLRERAFFAPVHSRYKIYIIDEAHMVTPQGFNALLKLV
EEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPKVLVEYLAELCGKEGIDVDHAVL
PLVVRAGGGSVRDSLSVLDQLLGGAADGHVSYEQAAALLGYTPEALLDEIVDAFAAGDAH
QVFATIDKVIEVGQDPRRFAEDLLRRMRDLVIVSAVPDACRSGLIDVSPEQATRLAHQVS
GFGAGELTRAAEVLATGLTNMRGTTAPRLHLELMCSRILLPGADTDGRGIHARLERLERR
IGVSGPVEEVERAERPVTAQPPTRYADTPQQASPPQHWPAENLQNPERRSAPEHHDAPSP
GQRPSGRPRPSRKDYRPGNQLAEQPPSNQHGDDGQMSQGPRQQGGPSTSQRQQPRPQDHQ
PSQRDRQDTPPAQPQQPSAEQGGRADDAINITTLRREWPQVLEAVKDGGRVAWMVLNQYA
QVLEVHGNQATLGFSNIGARENFAAGNYPKVLHDAVVKVLGVDLAFTAVVGEPPAAVRPE
SHPAEFQSGPAAQEPPDDDPWEQGPHHQDSTRGGEPSDPTHPGRDPQGRPGDRQAISDDA
SKDAPPPPVTSSHPSEAGDDDPAPDATTEDQSADVRDEVVESGPVAGAPDPDSGGAAEPK
PDLVPGQDHVEAAGRAESARQIDPGGASSQGRPSAAAVSTAHRWSERAKGSVRPLEVTSR
SAQVEEPPDDGGEWDDTVVEESNESPIDLIMRELGGVVIDTDGDSTAR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgaggccgttgagcctgaggtcttcgagcaagacggtccggatcttttcggt
gacgaggagtcgccgcgccccgtcatgcctcctgacgaagctacccctgatgatgacctt
ccctcggatccgtgcgatccagggttgctggacggccccgagacccctgaggaacccgac
ggcctcgagacagacgaggacgaggaggatggggctgacgttattgagcgggttcaggaa
ttaatcggggaagcccctgacagtaaccccgatgacgatcttccagagcttccgctggcc
ctctaccggcgttaccgtccggagaccttcgatgaggttattggtgaggatcatgttatt
gagcctctcaagcgcgcgatccttaataaccgcgtcaaccatgcctacttgttttcaggg
ccacgtggctgtggcaagacgacgaccgcccgcattcttgcccgagcgctgaactgtgag
cagggtccgacgccgactccctgcggaacgtgtcagtcctgtcgcgacctggcctgtggt
ggacccggatcgattgacgtcatcgagattgacgctgcctcccacggcggggtcgatgac
gcacgtgatttacgcgaacgcgcctttttcgccccagtacattcgcgttacaagatctac
atcatcgatgaggcccacatggtcaccccgcagggctttaacgccttgctgaaactcgtc
gaggagcccccgccacacgtcaagttcatcttcgccaccacagaaccggaaaaggtcatc
gggacgattcgctcccggactcaccactacccgttccgccttgtgccgccgaaggtgctc
gtcgagtatctggctgagctatgcggcaaggaggggatcgacgtcgaccacgccgtcctg
ccgctggtggtgcgtgccggtggtgggtcggtgcgagacagcctttcggtgcttgaccag
cttctcggcggtgctgctgatggccatgtcagctacgagcaggctgcggccctcctcggc
tacaccccagaggcccttctagacgagatcgttgacgcctttgccgccggggacgcccac
caggtttttgccacgatcgacaaggtcatcgaggtaggtcaggaccctcgccgtttcgct
gaggacctgctgcgtcgcatgcgcgacctcgtcatcgtctcggcggtccctgacgcctgc
cggagcggactcatcgatgtctcaccggagcaggccaccagacttgctcaccaggtttct
ggtttcggcgcaggcgaactcacccgcgctgccgaggtattggccaccgggctaactaac
atgcgcggcactaccgctccccggctccacctggagctgatgtgctcgcggattctccta
cccggagccgacacggatggtcgtggaatccatgcacgtttggagcggttagagaggagg
atcggcgtctccggccccgttgaggaggtcgaacgtgctgagcgtccggtcaccgcccag
cctcccactcgctatgcggacacaccacagcaggctagtcctcctcagcactggccagcg
gagaaccttcaaaacccggagcgtcggtccgcaccagaacaccacgacgccccgtcgccc
ggacagcgtccatctgggcgtccacgtcccagccgtaaggattaccggcccggcaatcag
cttgctgaacagccgccgtccaaccagcacggcgatgatggtcagatgtcgcagggacca
aggcagcagggcggtccgtcaaccagtcagcgccagcaacccagacctcaggaccaccag
ccgtctcagcgggatcgtcaggacaccccaccggcccaacctcaacagccttccgccgaa
caaggcggtcgcgccgacgatgccataaacatcaccaccttgcgtcgcgagtggccgcag
gtcctcgaagccgtcaaggatggcggacgtgtcgcatggatggtcctcaatcagtacgcc
caggtgcttgaggttcacggcaatcaggccaccttgggattctctaatatcggagcccgg
gaaaatttcgctgccggtaattacccgaaggtcttgcatgacgccgttgtgaaggtgctg
ggagtggacctggccttcactgcggtcgtcggggagcctccggccgccgtccgccccgag
tcccatcctgctgagtttcagagtggaccggctgcccaggaaccaccggatgacgatccc
tgggagcaagggccacaccatcaagactcgacgcgaggtggcgaaccgtcggaccctact
catcccggtcgggatcctcagggccgaccgggtgaccgtcaggcgatttccgacgacgct
tcaaaggatgcgccacccccgccggtgaccagctcccatcccagcgaggctggggacgac
gatcctgcccctgatgccacgaccgaggaccagtccgcagatgtccgcgatgaggtcgtg
gaatcgggacccgtagctggcgccccagaccctgacagcggtggagctgccgaacctaaa
cctgatctggtgccaggccaggatcacgtcgaggctgccggacgcgctgagtctgcgcgg
cagatcgaccctggtggcgcatcctcgcaaggccgtccctccgctgctgcggtcagtacc
gcgcaccgttggagtgagcgcgctaaaggaagtgttcgccctcttgaggtgacttcgcgg
tcagcccaggtcgaggagccgcctgatgacggcggggagtgggacgacaccgttgtggag
gagtccaacgagagtccgattgacctcatcatgcgcgagctaggtggggtcgtcatagac
accgacggtgactcaaccgccagatga
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