Cutibacterium acnes hdn-1: TIA1EST1_01250
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Entry
TIA1EST1_01250 CDS
T03470
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pacn
Cutibacterium acnes hdn-1
Pathway
pacn03030
DNA replication
pacn03430
Mismatch repair
pacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TIA1EST1_01250
03430 Mismatch repair
TIA1EST1_01250
03440 Homologous recombination
TIA1EST1_01250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacn03032
]
TIA1EST1_01250
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_01250
Enzymes [BR:
pacn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TIA1EST1_01250
DNA replication proteins [BR:
pacn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TIA1EST1_01250
DNA repair and recombination proteins [BR:
pacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TIA1EST1_01250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_16
AAA_5
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AID36854
LinkDB
All DBs
Position
297121..298329
Genome browser
AA seq
402 aa
AA seq
DB search
MSDVLTGVWADLVGQEKAVGVLRRAAESQPGRSSHAMSHAWLITGPPGSGRSNAAKAFAA
ALQCVDHGCGQCNACRTTLSGAHPDVTLVRTEALSIGVDEVRELVRRAAMNPVHGCHQVV
VVEDADRITERGADALLKAIEEPAPKTVWLLCAPTPEDVIVTIRSRCRRLHLATPRDEAV
ADLLTRRDGIAPEVAAEAARAGQGHIGRARRLAWDEEARARRNAIGELPTRLRSLGDCLQ
AAEDLVNQASEEAAAATAEVNAAERAELKKALGFGSSGARPRNAQAALRDLEKQQSARLK
RLQRDALDRVLTELTAYHRDVLAIQTGAVRPEEENALRGARLVNAGWSASLHRIADSQSP
EHTVATIDAILAARKSLEHGVTPLLVMETLLIAMTGVDRARW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgtgttgaccggcgtgtgggccgatcttgtgggtcaggagaaggctgtcggg
gtactgcgtcgtgccgccgaatcgcagccggggcgctcgtcccatgcgatgagtcacgca
tggctcattacgggtccgcctggatcaggtcggtcgaatgctgcgaaggcctttgcagcg
gcgctacagtgcgtcgaccatggatgcgggcagtgcaatgcctgtcgaaccaccttgtca
ggcgcccatcctgacgtcaccctagtgcgtactgaggcactgtctatcggcgttgatgaa
gtgcgtgaactggttcgtcgagcggcgatgaatccggtccacgggtgtcaccaagttgtc
gtcgtcgaagatgccgatcgcatcactgaacgcggagctgacgccttgcttaaagctatc
gaggagcctgcgccgaaaaccgtctggttgctgtgtgcccctactccagaggacgtcatc
gtcacaatcaggtcgagatgtcggcgccttcacctagctacgccgcgcgatgaggctgtg
gcagatctgctcacccgacgtgacggcattgccccggaggtggctgctgaggctgcccgc
gctggccaagggcatatcgggcgggcgcggcgtctggcctgggacgaggaggctcgtgcg
cgacgcaacgccattggtgagctccctacccggttgcggagcttgggggactgtctgcaa
gcagccgaggacctcgttaatcaggccagcgaggaggccgcagccgctaccgcagaggtt
aatgcggccgagcgggccgagctgaagaaagccctgggatttggctcctctggtgctcga
ccgcgcaatgctcaagctgctttacgggaccttgaaaagcagcaatccgctcggttgaag
cggttacagcgcgacgccttggatcgtgtgttaacagagttgactgcttaccaccgtgat
gtattggctatccaaactggcgctgtgcgtcctgaggaggagaacgctttacgaggagcc
cgccttgttaatgctggctggtcggcctcccttcatcggatcgcagattcgcagagtcct
gagcacactgttgccacgatcgatgcgatccttgcggcgcgcaagagcctggaacatggc
gtcacccccctgcttgtgatggaaactctccttatcgccatgacgggagtagaccgcgcc
cgctggtga
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