Cutibacterium acnes hdn-1: TIA1EST1_02840
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Entry
TIA1EST1_02840 CDS
T03470
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pacn
Cutibacterium acnes hdn-1
Pathway
pacn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TIA1EST1_02840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_02840
Enzymes [BR:
pacn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TIA1EST1_02840
DNA repair and recombination proteins [BR:
pacn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TIA1EST1_02840
Prokaryotic type
TIA1EST1_02840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UTP15_C
Motif
Other DBs
NCBI-ProteinID:
AID35459
LinkDB
All DBs
Position
complement(609629..610312)
Genome browser
AA seq
227 aa
AA seq
DB search
MVAHPVAELVTPDWAEALTGVEPRIHEMGDFLRAETAAGRGFLPHGDRILRAFSRPMADV
RVLIVGQDPYPTPGHPVGLSFSVERDVRPLPRSLQNIYTELQSDLGIAPCEHGDLTGWFE
QGVLLLNRCLTVQPGRPASHRGKGWEEVTQTAIEALVARGGPLVAILWGRDAQSLEPMLG
KVPIVKSSHPSPMSARYGFFGSRPFSRTNELLVQQGADPINWDLSSH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtggttgctcatcccgttgctgaactcgtcacccccgactgggcagaggcattaacagga
gtggaaccccggatccacgagatgggcgacttcctacgagcggagacagctgccgggaga
ggctttttacctcatggtgaccgtattctacgtgctttctcccgtccgatggctgatgtt
cgcgtacttatcgtcggtcaggacccctacccgacgcccgggcatccggtgggtttgagt
ttttcagtggagcgggatgtccgaccgctgccgcggtccttgcaaaacatctacaccgag
ttgcagtcagatctcggtattgccccatgtgagcacggtgatctcaccggctggtttgaa
cagggcgtactgcttctcaacaggtgtctaacagtccagccggggcggccagcatcccat
cgaggcaagggatgggaggaggtcacccagacggcgatcgaagctttggtggcgcgcggc
ggtccgctggtggcgatcctgtggggacgcgatgcgcagtccctagagcccatgctgggc
aaagttcctattgtaaagtcctcgcacccctcccccatgtcagcccggtacggttttttc
ggatctcgaccgtttagtcgcacgaatgaattgctcgtacagcaaggggccgaccccatc
aactgggatttgtcgtcccactaa
DBGET
integrated database retrieval system
