Cutibacterium acnes hdn-1: TIA1EST1_05130
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Entry
TIA1EST1_05130 CDS
T03470
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pacn
Cutibacterium acnes hdn-1
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacn03032
]
TIA1EST1_05130
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_05130
Enzymes [BR:
pacn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TIA1EST1_05130
DNA replication proteins [BR:
pacn03032
]
Prokaryotic type
DNA Topoisomerases
TIA1EST1_05130
DNA repair and recombination proteins [BR:
pacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TIA1EST1_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AID35818
LinkDB
All DBs
Position
complement(1113873..1116407)
Genome browser
AA seq
844 aa
AA seq
DB search
MTKKTVDDDFTENIIDVDVSREMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYTMGD
MGVRPDRPHVKSARVVGQVMGQLHPHGDAAIYDALVRTAQPWAMRLPLVDGHGNFGSLDA
GPAAMRYTECRMAPPALTMIDGLDEDTVDFEPNYDGKETEPSVLPAAFPNLLVNGASGIA
VGMATNIPPHNLVEVVAALRHMLDHPNADFDEIMRFVPGPDLPTGGRIIGLDGIADAYCT
GRGSFKIRATARIEKVSPRRRGIVVTELPYMVGPERIIDQIKTLVQSKKITGIADVKDLT
DLTNGTRLVIEVKNGINPEALLERLYKLTKLEDSFAINAVSLVEGQPRTLGLLEMLQVYL
DHRLDVTLRRTKFQLNKAQDRLHLVEGLLLAIVDIDDVIAIIRSSEDAAAARTRLMGTFD
LDEVQANYILDMQLRRLTKFSTIELESERDELRERIEGLTLIVNDKAELRRVVSGELVEV
SSKYGTPRRTVLLGAAPSVAAASAPLEVPDDPCWVLLSATGLLARIDTADGLPSDGDRAT
HDVIISSARTTARGDFGIITSAGRLVRVHAVELASLPITATAPSVAGGTPLADLVGLEKG
ERALAVTSLSGAGPSLALGTRNGIVKRVNPELLGKESWEVIGLKNGDEVVGAVEMGDEDL
ELCFVTQGAALLHFPASAVRPQGRSGGGVAGIKAKDPVIFFGAAPRRGSSVVTVAASSPA
AAGKEPGSIKLTPFDQYPPKGRATGGMRCQRFLKGETALVFAWIGPDPAVACAASGVPIE
LPAPNMRRDGSGDQGRQPILAVGSRRHGSNKGNPVSDGSNDALDSGDPLSTNEKQIDSQP
ELFS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaagacggtggatgacgacttcaccgagaacattatcgacgtcgacgtctcc
cgcgagatggagaacagcttcctggagtacgcatactccgtcatctactcccgcgccctg
cctgacgcccgggacggcctcaagcccgtacagcgccgcatcctttacaccatgggagac
atgggagttcgccctgaccgtccccatgtgaagtcagcgcgagtcgtcggacaggtcatg
ggtcagctgcacccccacggcgacgctgccatctacgacgccctggtacgcaccgctcag
ccatgggcgatgaggctccccctcgtcgacggtcacggtaacttcggatcccttgacgcc
ggccccgctgccatgcgttacaccgagtgtcggatggcaccgccagctcttaccatgatc
gatgggctcgacgaagacaccgttgacttcgaacctaactacgacggcaaagagaccgag
ccctcagtgttgccggccgccttcccgaacctgctcgtcaacggggcttcgggtatcgca
gtgggtatggcaaccaacatcccaccacataacctcgtcgaggttgtggcagctctccgt
catatgctcgatcatccaaacgccgactttgacgagatcatgaggttcgtgcccggaccg
gatctgccgaccggtggacgaatcatcggtcttgatggcatcgccgacgcctactgcacc
ggccgtggctccttcaagatccgtgctaccgcccgcatcgagaaggtttctccacgacgc
cgcggcatcgtcgtcaccgagctgccgtacatggtcggaccagagcgaatcatcgaccaa
attaagaccctggtacagtccaaaaagatcaccggtatcgccgacgtcaaggacctcacc
gacctgaccaacggcacccgtctggtcattgaggtcaagaacggcatcaaccctgaagcc
ctgctggagcggctctacaaacttaccaagctggaggattccttcgccatcaatgcggta
agtctggtggagggacaaccccgcaccttaggcctgctagaaatgttgcaggtctacctc
gaccaccgtctcgacgtcaccctgcgacgcacgaagttccaactcaacaaggcccaggac
aggctgcacctcgtcgagggtctgctattggccatcgtcgacatcgacgacgtcatcgcg
atcatccgctcctccgaagacgccgcagcagcccgtacccgcctcatgggaaccttcgac
ctcgacgaggtgcaggccaactacatcctggacatgcagctgcgccgcctgaccaagttc
tccactatcgaactggaatctgagcgtgacgaactgcgcgaacgcatcgaagggctaacg
ctcatcgtcaatgataaggccgagttgcgtcgcgtggtgtccggagaattggtcgaagtg
tcgtccaaatacggcactccgcgtcgcactgtgctgttaggagccgcgccatcggtcgca
gcagcatcagcccccctcgaggtgccagacgacccgtgttgggtactgctgtcggcaact
ggcttgctggcccgtatcgataccgccgacggccttcccagtgacggggacagggccact
cacgatgtcatcatctctagcgctcgcaccaccgcccgtggtgatttcggcatcattact
agtgccggtcgtctcgtgcgtgtccatgctgtcgaactcgcaagcctgccgataaccgca
actgcgccgtcagtagccggtggcaccccgctagccgaccttgtcggtttggagaagggc
gagcgagctctagccgtgacaagcctgtcaggagcgggcccttccttggctcttggtacc
cgaaacggcatcgtcaagagggtcaacccggaactactcggcaaggagtcttgggaggtt
atcggtcttaagaacggtgacgaggtcgtcggtgccgtcgaaatgggcgacgaggacctc
gaactgtgcttcgtcacccagggcgccgccctgcttcacttccctgcatccgcagtgcgc
ccgcagggacgctcaggtggcggtgtggccggtatcaaggccaaggatccagtgattttc
tttggcgctgccccccgacgcggatcctcggtggtaacggtggccgcatcttcccccgcc
gccgcaggtaaggaacccggctcgatcaaactcacccccttcgaccagtacccgcccaag
ggacgagccaccggtggtatgaggtgtcagcgattcctcaagggagagacggccctggtg
ttcgcttggatcggccccgatccggccgtggcctgtgccgcgtccggggtgcccatcgaa
ctgccagcacctaatatgcgtcgagacggctccggtgatcagggacgtcaaccgattctg
gccgtcgggagtcgtcgtcacgggtctaacaagggtaatccggtatccgacggatcgaac
gatgcattggattccggtgacccgttatcgactaatgagaagcagatcgattcccaaccc
gaactgttcagctga
DBGET
integrated database retrieval system
