Cutibacterium acnes hdn-1: TIA1EST1_06535
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Entry
TIA1EST1_06535 CDS
T03470
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pacn
Cutibacterium acnes hdn-1
Pathway
pacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TIA1EST1_06535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_06535
Enzymes [BR:
pacn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TIA1EST1_06535
DNA repair and recombination proteins [BR:
pacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TIA1EST1_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
Exonuc_V_gamma
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
AID37077
LinkDB
All DBs
Position
1398803..1401952
Genome browser
AA seq
1049 aa
AA seq
DB search
MAGVVKVFHSWRCVSDAVVAALSEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGI
DTTTPLGLRERLEEDLLGVKRENDPWQPGSLALRICRVIENNSPGFEVVSAHLEASRRQG
VPRATWTTARQAADAICALARDSHDVLNAWADGATPTTHQGDTDLAGDPLDPARAWWAPL
WRTLLAEPCHVPDPVSRHQLLVDAILTQSRSEPPIVWFSSTTTAQHDVSLAEALSASHDV
TIVHLDHGISGADPWRTFDRARSATTARWTSSSICTAQSAVTHRKELPTVEIHQCHGVDR
QAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAHLLSAGTLADIDHPAHQLRFTTPPQ
REHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAVQTRFGFSDDDQEAIERLVSQADIR
WGVDPAARDKAGLGRIKQSTWLAGIERMILAIAMSSTPPTYLGTVTPITDVGSTTIPLVG
KLAELVSRMRKAFLDTETPAPIATWKRRVSQIVDNLAAAPADAPRSALQTLALLTGLEGV
AEDREFDRQEIIDLLNWLSGIHRGRHSWFDGSIQVCRPGELTPVDHEVVIVVDPDQEAVH
ADLLQGLRDENLDPAAKARQDLLDVALSARTLLVVVRQARSPVSNLTVLPGPFTRTLSQA
LKAQSATPRCVKHGLQPFSADEFSHHSDTAWSGFDNTAAAAAGCHPGSQPRPHRVVLPPV
AKLPESRMSLIDLTLALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRI
LADLEHGFLLDDAINAERLRGSTPPGHLGQHIVTKLAEDAMQICQRANRLRGDQDEQFIE
IDFDLDEGNSPPLLWPDELIVDPMHPVHLHGRVGVRNHQIVHAVASRANARPLLDLWVDL
LAVTVATDEPGWFGVLVPNGDVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAH
ALVELSPMAHNDYRTGASALQVQWSREWDPNWAAFLGTDVGELIACCHELGTTLTELSEW
LFDPIKQALRGAGSSPSTMAQFSNSGRRA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtggtgaaggtcttccattcctggcgctgcgtcagtgacgccgtcgtagca
gctttgtcggagcccaccaccgatccattcgtccggccgattctggttgctcctggcaat
gctcagtctcgatctttgctgcaatcccttgcccgccgtcatggaatcgccgccggtatc
gatacaacaacgccgctgggcctacgagaacgactcgaggaagatctcctgggagtcaag
cgggaaaacgatccgtggcagcccgggtccctggccctgcgtatatgccgcgtcattgag
aacaattcccccggttttgaggttgtttcagcccatctggaagccagccgtcggcaagga
gtgccgcgtgcaacatggacaactgcacgacaagctgcagacgcgatctgcgcgctagct
cgcgactctcacgacgtcttgaatgcctgggccgacggtgccacccccacaactcaccag
ggtgatactgaccttgcgggtgaccccctggatcccgcccgcgcgtggtgggccccgctg
tggcgtacccttcttgccgaaccatgccatgttccggaccccgtgagccgacaccagctc
ctcgtcgacgcgatactcactcagtcacgatctgaaccgccgatcgtgtggttttcatcg
acgaccacggctcagcacgacgtcagcttggcggaagcgttgtcggcctcacacgacgtc
accatcgtccatctcgatcatggcattagtggtgcggatccgtggcggacctttgaccgg
gcgcgctctgccacgaccgcgcgatggacatcgtcatcgatctgtacagcgcaaagcgcg
gttacccaccgcaaagagctgccaacagtcgaaatacaccaatgccacggagttgatcgt
caggccgaagtagtgcgtgatgttgtatgcgcagctctcgccgactacccaaccttggaa
cccagggacatcgtcgtcatatgttgcgggcgccaggacaccgcccaccttctttccgct
gggactttggcagatatcgatcaccctgcacatcagttgcggttcacgacccctccgcaa
cgcgagcatgttaatcccgtcactgaagcggtaacgaccatcttgggcctggcctcctca
cgtgccacgggacaagacttactcagtctgtgcgccatgcctgcggtgcagactcgattc
ggattctccgatgacgaccaggaggcgattgaacggctggtgagccaggccgatatccgg
tggggagttgaccctgccgcaagggacaaggcagggctgggccggatcaaacaatcgacc
tggctggctggcatcgaaaggatgattctcgccatcgcgatgtcgtctacaccaccaact
tatctggggacagtgacgccgattactgacgtcggatcgacaacaatccccctcgtcggg
aaactcgctgaactcgtatcccgaatgcgcaaggcgttcctcgacactgaaacacctgca
ccgattgccacctggaaacgccgggtcagccagatcgttgacaaccttgctgccgctccc
gcagacgctcctcgatcggcgctacagactcttgccctgctgacaggtctggaaggggtc
gcagaagacagagagtttgatcgccaggagatcattgacctcctcaactggctctcaggc
atccatcgtgggcggcacagctggttcgatggatcaattcaggtgtgccgtccgggtgag
cttacccccgtcgaccacgaagtcgtgattgtcgtcgaccccgaccaagaagctgttcat
gccgatctccttcaaggcttgcgagatgaaaacctcgatccggctgctaaagcacgacaa
gaccttctcgacgtcgctctgtcagccagaaccctcctggtcgtcgtgaggcaggcgcgc
agccctgtgagcaacctcaccgtgctgccgggcccctttacgagaaccctctctcaagct
ctcaaggcgcagtccgcaacaccgcgttgcgttaaacacggtttgcaaccattctctgcc
gatgaattctctcatcacagtgataccgcttggagtggattcgacaacaccgcggccgca
gcggcagggtgtcatcctggatcacagcctcgaccccatcgtgtcgtattgcccccggta
gccaagttgcctgaatcccggatgtcccttatcgacctcactctcgccctgtctcacccg
gcacggacgctcttgcgagcccgtgctggtgcaccagctaatgaaagatctactgacctt
ccggtcgacctgccactggcaccaagctcattagacaaatactggatacgttcccggatc
ctggctgacctggaacacggttttctgctagacgacgccatcaatgctgaacggctccgc
ggctctactcctccagggcacctgggccagcacatcgtcaccaaattggctgaggacgcg
atgcagatttgtcagagggccaatcggctccgtggcgaccaagacgagcagttcatcgaa
attgacttcgatctcgatgagggtaacagccccccattgctatggcctgacgaactcatt
gtcgatcccatgcacccagttcacctgcatggtcgagtcggtgtgaggaaccatcagatt
gtccacgctgtcgcatcccgggcgaatgctagaccgctcctcgacctgtgggtcgatctg
ctcgctgtgaccgtcgccactgacgaacccggatggtttggagtcctggtcccgaacggc
gacgtcctgcggatggcttccccagcgccggatcatgctcgcgacatcctggctgggctc
gcccgagtcgcctggtggagcaaccagcaactcatcccgttgcctgtgaaattggcacac
gcgctcgtcgagttgtcccccatggcgcataacgactatcgcaccggagccagcgccctc
caagtgcagtggtcgcgagaatgggatccaaactgggcggcatttttgggaaccgatgtg
ggtgagctcatcgcctgctgccatgagttaggtaccaccttgacggaactttccgaatgg
cttttcgatccgattaagcaggcgttgagaggggctgggtcttcaccatcgacgatggca
cagttttcgaattcggggaggagggcatga
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integrated database retrieval system
