Cutibacterium acnes hdn-1: TIA1EST1_06540
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Entry
TIA1EST1_06540 CDS
T03470
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pacn
Cutibacterium acnes hdn-1
Pathway
pacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TIA1EST1_06540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_06540
Enzymes [BR:
pacn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TIA1EST1_06540
DNA repair and recombination proteins [BR:
pacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TIA1EST1_06540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AID36027
LinkDB
All DBs
Position
1401949..1405185
Genome browser
AA seq
1078 aa
AA seq
DB search
MTTNTSFDITQPLPQGTVLLAASAGTGKTWTISAVCAKAIATGLVHMENLLLVTFNRSAA
RELRGRVYERLVNTRLLLAGAREPSDPCDWSLIRCGQAGLTRVESALDNFDRAVITTTHE
FASRMLVELGVLSDHDPSSVLMTDLAPLATEVSDDHYLAQYLDCDRPPSVRDKRELSRDV
AVKYGEVPIFSKDDADTPVQDVLWALSVREDVRRRSKSRSVHTFDDLIGDLVKALRDPYR
GPLACATLAHRFGLVMVDEFQDTDPLQWEILRRAFHGHSNLWLIGDPKQSIYAFRGADIH
AYQDAAQSASHVLHLDVNYRTDKPIVEAVNTLFSNAQLGHDISMELVTAHHQESRIKTAA
TDGPRYHWSQPFQIRCLQAPAGAQLNTATSDQFVTEDLVNQVIMMLEGGTVVQDGDGLRP
LRPTDIAILVRTRRRGAELATALSQAHQPAVFSGASPVWSSQAAEDLITLLEALENTDER
LRTRLCLSDLIGATPADLAASDSRVRSDLAIDLARWSSTWTMTGVWGTVEAALHRPGVLV
RLVSMAGGERYVTDLRQVAQKAHIAACEGRLTATATAAWIREQQQLAGDDEPRRLDSDQQ
AVIIMTIHEAKGLGFPVVLLPDITNGWAPKQSINGPIVWHDGQRRVLDISSQGTDRSIAI
ESHEEDERGENLRLLYVALTRARSAVRLWWSPCPLRHRWSAFQRLVEMDRTTGELGSGVA
GTDPGTLPWLNSGPIATVIAPANQKLLTRSVSAQPRACVVPRTLTRPLDTAFARTSYSGL
TANLHAAVSEPMTDGLIDEPVDDETVDDTAPGLCGLPGGTSFGTLVHTVLEYIDTAAIDL
SSEVLSITRRALRMSPLPDVPPSELATSLEQVLHSDLGPLAPGMTLADFSPADRLAEMNF
ELAMAQSGRSTTMTDLASLLCDPSLVPPDDPISGYGEILAHIPNGDQALRGFLTGSIDAV
LRRPDGRHLVVDYKTNRIPGVHKLSPHMYDAHTMRTMMFSSHYPLQGLLYSAALHRFLAS
SLPGYDPATHLGPIGYLFVRGMADRPVPDGDMPDGVFTWHPRPELIEAISERLGGLHD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacacctcctttgacatcactcaaccactgccacaaggaaccgtcctgctg
gcagcaagtgccgggactggaaagacatggaccatctcggcggtgtgcgcgaaagctatc
gcgactggtctggttcacatggagaaccttctcctggtgaccttcaaccgatcagctgcc
cgcgagctgcgcggacgagtctacgaacgccttgtcaacacccgtttgctactagcaggc
gcccgggaaccctctgacccctgcgattggtcgcttatccgatgtggccaggcaggactc
acacgagtggagtctgctctcgataacttcgacagggcggttatcaccaccacccatgag
ttcgcgtcccgaatgcttgtggagttgggagtgttatcagaccatgacccgtcctcagtg
ctgatgactgatcttgcccccctagcaaccgaggtatccgatgaccactacctggcacag
tatctcgactgtgaccgaccgccctcagtgcgcgacaaacgcgagctatctcgagatgtc
gcggtgaaatacggcgaggttccgatcttctccaaggacgatgcagacacgcctgtgcaa
gacgtgctgtgggccttatcagtacgagaagacgtccggagacgctccaaatcgcggtcg
gttcatacttttgacgaccttattggcgatcttgtcaaggctcttcgtgacccataccgt
ggcccgttagcttgcgcaacgcttgctcatcggtttggactcgtcatggttgacgagttc
caagacactgatcccctgcaatgggagatactgcggcgagccttccacggccacagcaac
ctttggctgatcggcgacccaaaacagtcgatctacgccttccgaggggctgacatccac
gcttatcaagacgcggcccaatctgccagccatgtccttcatcttgacgtcaactaccga
actgataagcccattgtcgaggccgttaataccctctttagcaacgctcagttgggccac
gatatctcaatggagttagtgacggcccatcatcaggaatctcgaattaagacagcggcc
accgatggaccgcgctaccactggtctcaacccttccagatccgctgcctccaagctcct
gccggcgcgcagctcaacacagccacctccgatcagttcgtcactgaagacctcgttaat
caggtaatcatgatgctcgagggcggaacggtcgttcaagatggcgacgggttaaggcca
cttcgccccaccgacatcgcgatcctggtgcgaacacgtcgcaggggtgccgaacttgcg
acagcgctatcacaggcccatcagcctgcagtgttctctggtgcttcaccggtgtggtcg
tctcaggcggctgaagatcttataaccttgctcgaggctctcgagaataccgatgaaagg
ctgcggaccagattgtgcctgtctgacctcatcggtgcaacgccagccgatttggcagca
tccgattcgcgggtgcgctctgacctggctattgacctggctcgctggtcgagtacctgg
acgatgacgggggtatggggaacggttgaggctgcccttcatcgccccggtgtgctggtg
cgtctggtaagcatggcaggtggtgagcgatacgtcaccgatctacgtcaggtggcgcaa
aaggcgcatattgcggcctgtgaaggaaggttgacggcgacggcaaccgcagcgtggatc
cgcgagcaacagcaactggcaggcgacgacgaaccccgtcgccttgatagtgaccaacag
gctgtcatcatcatgaccatccatgaggcaaagggtctgggattccccgtcgtgttattg
cctgacatcaccaatggatgggcgccgaagcagagcatcaatggtccgatcgtgtggcac
gacgggcaacggcgcgtgttggacatcagttcgcagggaaccgatcgttccatagcaatc
gagagccacgaagaggacgagcggggcgagaaccttcgcttgctgtacgtcgccctcacc
cgcgcccgatctgctgtacgactatggtggtccccttgtcctctgcgtcatcgatggtcc
gccttccaacgccttgtcgagatggaccgcacgacgggcgagctcggctcaggcgttgcc
gggaccgaccccggaactctcccctggctcaactccggaccgattgcgacagtaatagcg
cctgctaaccagaaactccttacccggtcggtcagcgcccagcctcgtgcctgcgttgtc
cctaggacgctgacgcgaccactcgacaccgcgtttgcccgaacctcatattcaggactg
acggccaacctccacgcagccgtgtcagaacctatgactgacggcctcatcgatgaaccc
gttgacgacgagaccgtcgatgacacagcccccggtctgtgtgggttacccggaggaacc
tccttcggcaccctggttcacacggtccttgagtacatcgacaccgcggccatcgacctc
tccagcgaggtactctcaatcacccgcagagcccttcgaatgtcgcccttaccagacgtc
ccgccatccgaactcgccaccagtttggagcaggttcttcacagtgatctcggacccttg
gccccgggcatgaccttggcagatttttccccggcggatcgactggctgagatgaatttc
gaacttgccatggcccagtccggacgatcgaccaccatgacagacctagcgtccctcctc
tgcgatccgagtctggtgccacccgacgatcccatcagcggctacggcgaaatattggcc
catatccccaatggcgaccaggcgctacgcggctttctcaccggttcgatcgatgcggtc
ttaaggcgacccgatggtcgtcatctagttgtcgattacaagacgaaccgaattcctgga
gtccacaagctcagtcctcatatgtatgacgcacacacgatgaggaccatgatgttcagt
tctcactacccgctgcaaggattgttgtattcggcagccttgcatcgattcctggcatca
agtctgcctggatacgaccccgcaacccatctcggccccatcggctacctttttgttcga
ggtatggctgatcgtccagtacccgacggtgacatgcctgacggagtttttacctggcat
ccgaggcctgaactcattgaggcgatcagcgagcgattgggaggtctccatgactga
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