Cutibacterium acnes hdn-1: TIA1EST1_07415
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Entry
TIA1EST1_07415 CDS
T03470
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pacn
Cutibacterium acnes hdn-1
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pacn03016
]
TIA1EST1_07415
Enzymes [BR:
pacn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TIA1EST1_07415
Transfer RNA biogenesis [BR:
pacn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TIA1EST1_07415
Prokaryotic type
TIA1EST1_07415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AID36158
LinkDB
All DBs
Position
complement(1581771..1582658)
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AA seq
295 aa
AA seq
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MDTLQSGVLVVDKPAGVTSHQVVGRVRRLMGTRKVGHAGTLDPMASGVLVVGVNRATRLL
GHLSLHDKDYTATVRLGVGTVTDDAEGDVTVTTDASAIDDRAIHAAMVRQTGEIQQVPAA
VSAIKVNGRRAYAKVRAGEDVVLRPRAVTVSRFEAIAIRRHGQVIDVDVEATCSSGTYVR
ALARDVGADLGVGGHLTALRRTRVGPFDLTAACVDIFAQDAVTPTPMTMAEAAALSFPVV
HVTADQAAAIRVGRRLSFTVPAEVTAIIAETGELLALYRPDDEKDGQSRAICVLV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggatactctccagtctggcgtcctcgtcgttgacaaacctgccggcgtcacgtctcac
caggtggttgggcgggtgcggcgcctcatgggtactcgcaaggtcggccacgctggaact
cttgacccgatggccagcggcgtcctcgtcgttggggtcaatcgcgcgactcgcctgttg
ggtcacttgtctctgcatgataaggactacaccgccaccgtgaggctaggggtgggcact
gtcaccgatgacgccgagggggacgtcactgtgaccaccgacgcttccgcaatcgacgac
agggccattcacgccgctatggtgcgtcagacaggagagatccaacaggttcccgctgcc
gtcagcgcgatcaaggttaacggccgtcgggcctacgccaaggtgcgtgctggtgaggac
gtcgtcctacggccgcgcgctgtcaccgtttctcggtttgaggctattgctattcgacgt
cacggtcaggtaattgacgtcgacgtcgaggctacgtgctcctcgggaacctacgtgcgg
gcgctggctcgtgacgtcggtgcggatcttggagtcgggggacatctcaccgccctgcgt
cgtactcgcgtcggcccgttcgatctcaccgctgcctgtgtagatattttcgcgcaggac
gccgtcacacccaccccgatgacaatggctgaggccgctgcactcagtttccccgttgtt
cacgtcactgcggaccaagcagctgctatccgggtgggtcgacgtctaagtttcacggtg
ccggcggaagtgaccgcaataattgcggaaactggtgaattgttggccctatatcgtccg
gatgacgagaaagatggccagagtcgcgcaatatgtgtgctggtgtga
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