Cutibacterium acnes hdn-1: TIA1EST1_08670
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Entry
TIA1EST1_08670 CDS
T03470
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pacn
Cutibacterium acnes hdn-1
Pathway
pacn03420
Nucleotide excision repair
pacn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TIA1EST1_08670
03430 Mismatch repair
TIA1EST1_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacn03400
]
TIA1EST1_08670
Enzymes [BR:
pacn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TIA1EST1_08670
DNA repair and recombination proteins [BR:
pacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TIA1EST1_08670
MMR (mismatch excision repair)
Other MMR factors
TIA1EST1_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AID36345
LinkDB
All DBs
Position
complement(1870512..1872944)
Genome browser
AA seq
810 aa
AA seq
DB search
MTTPDLFSFFESAHERRSSVEPGVLPTYAPVTAGAASPADLLVDLNEPQREAVLHAGSPV
LVVAGAGSGKTRVLTRRIAHLVGDRGVHPGSILAITFTNKAAAEMKARVVDLVGNRAKPM
WVSTFHSAAVRILRTDIDRLGISRNFSIYDDTDAKRLITLVTRDQNLDPKKFQPRAIMNW
ISHQKNELIAPDQAVAAAKSGNDRINGDVYVEYQRRLRAANALDFDDLIMCTVTVLRQFP
EVREQYRRRFRHVLVDEYQDTNTAQYQFIRELCGDDPVELDDGARSVDPPELMVVGDSDQ
SIYAFRGATIRNIIDFEKDFPGARTILLEQNYRSTQTILTAANNLIKVNLNRPAKNLWTD
QGDGDKIVGYVADTEHDEAAWVARRIDELVDEGRTSYGQVAVFYRTNAQSRAFEDVFIRT
GLPYRVVGGVRFYERKEVRDAVSYLRAIANPSDDVSLRRILNTPRRGIGARAEAAVEMFA
TARRISFWEALKRIDEIDGLATRSVNQIRAFVSLMDDHIAMVGQGKRADEIANSILKESG
YITELENSKDPQDETRLENLVELVSVAQEFVARVHAVDIDEAEQGNVEDLELSGDDSLPA
FLEQIALVADSDQVPADSDGVVTLMTLHTAKGLEFDTVFITGFEDGVFPHMRSLADATEL
SEERRLAYVGITRARKQLFVSRASVRTMWGQAQYNPPSRFIDEIPEHLIEWERIGQASVG
WSTSASGRSQSARGALRDDTPAFGSGRGSASALKGRTLALSVGDKVLHSTFGLGTVKATS
GQGDNAKADVDFGSAGLKRLALRFAPLEKL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccggatctgttttcgtttttcgaatcggctcatgagagacgcagctctgtt
gagccaggggttttgccgacctatgcccccgtgacggccggagcagcctctcctgctgac
ttactggttgatctcaacgagccccaacgtgaggcggtgttgcacgccggttcgccggtc
ctcgttgtcgcgggggcaggctcgggaaagacgagagttctcacgcgacgcatcgctcac
ctggtgggggaccgaggcgttcatcctgggtcgattttggcgatcaccttcaccaataaa
gcggcggccgagatgaaggcgcgcgtcgttgacctggtgggaaatcgcgctaaaccgatg
tgggtgtcaaccttccattctgctgcggtgagaatactacgcaccgacattgaccgtctg
ggcatttcccgtaatttctcaatctatgacgatacggacgctaaaaggcttatcactctc
gttacccgtgaccagaatctggatcctaagaagttccagcctcgcgctatcatgaactgg
atctcacatcaaaaaaacgagctcattgccccggatcaagcagtcgcggctgccaaaagc
ggaaatgatcgaattaatggtgacgtctatgtcgagtaccaacgcagactacgagctgcc
aatgcgctggatttcgatgatcttattatgtgtaccgtcaccgtgttgaggcagttccct
gaggttcgcgaacagtatcgacgtcggtttcggcatgtactcgttgatgagtatcaggac
actaacaccgcccaatatcagttcattcgtgagctgtgtggggatgacccagtcgagcta
gatgacggtgctcgcagtgtcgatccgccggagctcatggtggttggcgattcagatcag
tcgatttacgcatttcgtggcgcgacgatccgtaacatcattgactttgaaaaggatttt
ccgggggctaggacgattctcctggagcagaattatcgctcgactcagacgattcttacc
gctgcaaacaatctcattaaggtcaatctaaatcgtcccgccaaaaacttgtggactgat
cagggcgatggcgacaaaatcgtcgggtatgttgctgatactgaacatgacgaggccgcc
tgggtggcccgacgtattgacgaactcgtcgatgagggacgtaccagctatggacaagta
gccgttttttaccgtaccaacgcccaatcgagggccttcgaggatgtctttattcgcact
ggcttgccctaccgtgtcgtcggcggtgtgaggttctacgagcgcaaagaagtccgggac
gccgtcagttacctgcgcgcgatcgctaacccctccgatgacgtttccctgcgtcgcatc
ctcaatactccgcgccgtggcatcggggcgcgagctgaagcagccgtcgagatgtttgct
actgctcgcagaattagcttctgggaagctctgaaacggatcgatgaaatcgacggtcta
gcaaccagatcggtcaatcaaattcgagctttcgttagcctcatggatgaccatatcgcc
atggtggggcaggggaaacgggccgacgagatcgccaactcgatcctgaaagaatccggt
tacatcaccgagctggagaactccaaagacccgcaggatgagacgaggctggaaaacctc
gtcgagcttgtttcggtggctcaggaattcgttgccagagttcatgctgtcgatattgac
gaggctgagcagggcaatgtcgaagacctcgaattgtccggcgacgactctttgccggcc
ttcctggagcagatcgccttggtcgccgattccgaccaggtaccagccgactccgatgga
gtcgtcaccctcatgaccctgcacaccgccaaaggtttggagttcgacacagttttcatc
actggatttgaggacggtgtcttccctcacatgaggtctcttgccgacgccactgaattg
tctgaggagagacggctggcttacgtcggtatcactcgcgctcgcaaacagctgtttgtg
tcgcgggcctctgtgcgcacgatgtggggccaggctcagtacaacccaccgagccgattc
atcgacgagatccctgaacacctcattgagtgggagagaatcggccaggcctcggtggga
tggtcaacttcggcgagtggccgctcgcaatcagcacgcggggcccttcgcgacgacact
ccggccttcggttctggacgagggtcagcaagtgcgctcaagggacgcaccctcgcgctg
tcggtaggggataaagtgcttcactcgaccttcgggctggggaccgtcaaagccacgtca
ggccagggcgacaatgccaaggctgatgtcgacttcgggtcagcggggctcaagaggttg
gcgttgaggttcgctccactggagaagctgtaa
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