Arcobacter acticola: AACT_0117
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Entry
AACT_0117 CDS
T06605
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
paco
Arcobacter acticola
Pathway
paco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AACT_0117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paco03019
]
AACT_0117
03009 Ribosome biogenesis [BR:
paco03009
]
AACT_0117
Enzymes [BR:
paco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AACT_0117
Messenger RNA biogenesis [BR:
paco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AACT_0117
Ribosome biogenesis [BR:
paco03009
]
Prokaryotic type
rRNA helicases
AACT_0117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QKE27351
UniProt:
A0A6M8EKI6
LinkDB
All DBs
Position
109119..110768
Genome browser
AA seq
549 aa
AA seq
DB search
MTFNEFNLKELLQKAIDEAGFKEPSPIQEQAIPFVLDGRDIVGQAHTGTGKTAAFGLPIL
NKMKGNSGVEAVVIVPTRELAMQVSDELYRFGRFLGINTATVYGGQAYARQIKLIENAGI
IVATPGRFLDLLRGGKIDIKPEYVILDEADEMLDMGFLDDIKEIFTFLPEERQTLLFSAT
MPVAIKNLAKTILKDPEFITLTKKDVTNSKITQTFYVVDERERDDALIRLYDYKNPTKSI
IFCRTKKEVDRLSTFMVSQGFMAKGLHGDMEQRQREEAIRAFKTSKLEILIATDVAARGL
DVNDVSHVFNYHLPFDSESYVHRIGRTGRAGKEGVAVSIVTPHEFRMLQKIEKNIGTKLE
GKAIPNIDSVKLKKVAELKNQISEQEIQDYALALVEELKEEFDISTIAFKLASMISASTF
VQGNNNIGKSESDIKRLVENASRYEGEGRGDRNSRGGRGGRYGSSRGGDSRGGNRGGRPS
GDRNSRGGDRDRAPRGDRPSGDRAPRGDRPSGDRAPRGDRPSGDRAPRGDRPSGDRGSRP
SGDRSRKRD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaacgaattcaatttaaaagaattattgcaaaaagcaatagatgaagcaggt
tttaaagaaccaagtccaatacaagaacaagcaattccatttgtattagatggaagagat
attgttggtcaagcacatacaggaactggtaaaacagctgcttttggtcttccaatttta
aataaaatgaagggtaatagtggtgttgaagctgttgttattgttcctacaagagaactt
gcaatgcaagtttcagatgaattatacagatttggtagatttttaggaattaacactgca
actgtatatggtggacaagcttatgctagacaaatcaaattaatagaaaatgcaggtatt
attgttgctactccaggaagatttttagatcttttaagaggtggtaaaattgatattaaa
cctgagtacgtaattcttgatgaagcagatgaaatgcttgatatgggattcttagatgat
attaaagagatttttactttcttaccagaagaaagacaaactttattattctctgcaact
atgccagttgctatcaaaaatcttgcaaaaactattttaaaagatccagaatttattact
ttaactaaaaaagatgtaactaattcaaaaattactcaaactttttatgttgttgatgaa
agagaaagagatgatgctttaattagattgtatgattataaaaatcctactaaatctatt
attttctgtcgcacaaaaaaagaagttgatagattatcaacttttatggtatctcaagga
ttcatggctaaaggtcttcatggagatatggagcaaagacaaagagaagaagcaattaga
gcatttaaaacttctaaattagagattttaattgcaactgatgttgctgcaagaggatta
gatgtaaatgatgtttctcacgtatttaattatcatttaccatttgattctgagtcttat
gttcatagaattggaagaacaggacgtgctggaaaagaaggtgttgctgtttctattgta
actccacatgaattcagaatgttacaaaaaattgaaaaaaatattggtacaaaattagaa
gggaaagctattcctaatattgattcagttaaattaaaaaaagttgctgaattaaaaaat
caaattagtgagcaagaaattcaagattatgctttggcattagttgaagaattaaaagaa
gaatttgatatctctacaattgcatttaaattagcttcaatgatttctgcatctacattt
gttcaaggtaataataatatcggtaaatctgaatctgatattaaaagacttgttgaaaat
gcaagtagatatgaaggtgaaggtagaggagatagaaactctagaggtggccgaggtgga
agatatggttcttctagaggtggcgattcaagaggcggaaatagagggggaagaccatct
ggagatagaaactcaagaggtggcgatagagatagagcaccaagaggtgatagaccatca
ggtgatagagctccaagaggagacagaccatctggagatagagcaccaagaggtgacaga
ccaagtggtgatagagctccaagaggcgatagaccttctggggacagaggttctagacca
agtggtgatagaagtagaaaaagagattaa
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