Arcobacter acticola: AACT_0132
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Entry
AACT_0132 CDS
T06605
Name
(GenBank) mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
paco
Arcobacter acticola
Pathway
paco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AACT_0132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paco03019
]
AACT_0132
Messenger RNA biogenesis [BR:
paco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AACT_0132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
MupG_C
Motif
Other DBs
NCBI-ProteinID:
QKE27366
UniProt:
A0A6M8EDL2
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Position
complement(125370..127334)
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AA seq
654 aa
AA seq
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MEEINKEEQAVVNKQEIQTTNQNVNDTNSTTTTNEQTSDGVETKKPPFKKRKPKPKTNPN
ANAVVNQQKAEGWITDLKKAHLINEKIHRDRLNPHYKLNLNTASKLKITPLGGLGEIGGN
MMVIESDNEAIIVDVGMSFPDENMHGVDILIPDFTYIREIKDKIVGIIITHGHEDHIGAM
PYLFKEMQFPVYGTSLPLEMIGSKLDEHKMREHRSYLRAIQKRTPIKIGEFEVEWIHVTH
SIIDCSCIAVTTEAGTMIHTGDFKIDHTPYDGLPTDLHRLAHYGEKGVLLLTSDSTNSHA
PGFTRTEKTVGPTFDRLFAGAKGRILMSTFSSNIHRVAQAIERAITFGRKICVIGRSMEK
NLDLAMTLGYIKFPKDQFIEAHEVNKYNDKEVLIVTTGSQGESMSALYRMAIHEHRHIKI
KPDDQIILSAKAIPGNEASVSGIINHLLKAGAKVAYQDYGDIHVSGHASQEEQKLMLRLV
KPKFFLPVHGEYNHALKHGQTGIDCGVLERNVYIMSDGEQIEVSPKYLKKVKTVKTGKVY
IDNQLNNKISDDVILDRQTMANEGVVMIVAQINENDRTMAQRPKVTSFGLVPDKQDKFFS
KEIEDLLSTFLENIKPGILKNNRILEDELRKVVRKHCTRKYKKYPMIVPTIFVQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaataaataaagaagagcaggctgttgttaataaacaagaaattcagacaact
aatcaaaacgtaaacgatactaatagtacaacaacgacaaatgaacaaacttcagatggt
gtagaaacaaaaaaaccacctttcaaaaaaagaaagccaaaaccaaaaactaatccaaat
gctaatgctgttgttaatcaacaaaaagctgaaggatggattacagaccttaaaaaagca
catttaattaatgaaaaaattcatagagatagattaaatcctcattataaattaaatctt
aacactgcatcaaaacttaaaatcacaccacttggtggattaggtgagattggtggtaac
atgatggttatcgaaagtgacaatgaggcaataatcgttgatgttggtatgagtttccct
gatgagaatatgcatggtgttgatattttaattcctgattttacttatattagagaaatc
aaagacaaaattgttggtattattattactcatggtcacgaagatcatattggtgcaatg
ccatatttatttaaagaaatgcaattcccagtttatggaacatcattacctttagaaatg
attggttcaaaacttgatgaacataaaatgagagaacatagatcatatttaagagcaatt
caaaaaagaacacctataaaaataggggagtttgaagttgaatggatacatgttactcac
tctattattgactgttcatgtattgcagttacaactgaagctggaactatgattcatacg
ggagatttcaaaatagatcatactccatacgatggattaccaacagatttacatagactt
gcacattatggagaaaaaggtgttttacttttaacatcagattcaactaattcacatgca
cctggttttacaagaacagaaaaaactgttggaccaacttttgatagattatttgcagga
gcaaaaggtagaattcttatgtctacattctcttcaaatattcatagggttgcgcaagca
attgaaagagcaataacatttggaagaaagatttgtgttattggaagatcaatggaaaaa
aatctagatttagcaatgactttaggttatatcaaattcccaaaagatcaatttattgaa
gcacatgaagtaaataaatataatgataaagaagttttaattgtaacaacaggttctcaa
ggtgaatcaatgtcagcactttatagaatggcaatacatgaacatagacatatcaagata
aagccagatgatcaaattatattatctgctaaagcaattcctggaaatgaagctagtgta
tctggtattataaaccatttattaaaagctggagctaaagttgcatatcaagattatggt
gatattcacgtttctggacatgcttctcaagaagagcaaaaattaatgcttagacttgtt
aaacctaaattctttttaccagttcacggtgaatataatcatgcattaaaacatggacaa
acaggtattgattgtggtgtattagaaagaaatgtttatatcatgagtgatggtgagcag
atcgaagtaagccctaaatatcttaaaaaagtaaaaacagttaaaacaggaaaagtttat
attgataatcaattaaacaacaaaatttctgatgatgtaattttagatagacaaacaatg
gcaaacgaaggtgttgttatgattgttgcgcaaattaatgagaatgacagaacaatggct
caaagaccaaaagttacttcttttggattagttcctgataaacaagataaattcttctct
aaagaaattgaagatttattaagtacattcttagaaaatataaaaccaggcatcttaaaa
aataatagaattttagaagatgaattaagaaaagttgtaagaaaacattgtacgagaaaa
tataaaaaatatcctatgatagttcctacaatatttgttcaataa
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