Arcobacter acticola: AACT_1960
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Entry
AACT_1960 CDS
T06605
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
paco
Arcobacter acticola
Pathway
paco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AACT_1960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paco03019
]
AACT_1960
Enzymes [BR:
paco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AACT_1960
Messenger RNA biogenesis [BR:
paco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AACT_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HI1480
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
QKE29105
UniProt:
A0A6M8EX12
LinkDB
All DBs
Position
complement(1935984..1937369)
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AA seq
461 aa
AA seq
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MSFSNLGLCAELLRAIKEEGYTTPTPIQAKSIPVILSKKDVLAGAQTGTGKTAGFTLPLL
QRLKTSYNKDKKSHVRALILTPTRELAAQVAASVETYGKYLPFKSAVIFGGVGINPQIAL
LRKGVDIVIATPGRLLDLVSQNCLDLRKIEFFILDEADRMLDMGFINDIKKVLAILPKER
QNLLFSATFSEDIKKLADSLLNSPVLIEVATANSTSHKVEQIVHHVDRERKKELLLYLVN
KNNWKQVLVFTRTKHGANKLSEALVKDGITSAAIHGNKSQGARTKALDDFKSGNVRVLVA
TDIAARGIDIDQLPHVINFELPNIAEDYVHRIGRTGRAGNTGDAISLVCVDEHDYLFGIE
KLIKQKIKKVEILGFKVDPNIKAEPIGNRSNRGNGSNQNRTAKPKDASRKPSGRKKEEAA
PSKNKNSNNRNSDNKYGSKNSNHATNNTSKNRRTNSGFKNN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcaaacttaggtttatgtgcggaacttttacgtgcaataaaagaagagggt
tatacaactccaacacctatccaagcaaagtcaattccagtaattttatcaaaaaaagat
gttctagcaggtgctcaaacgggtactggaaaaacagctggttttacacttccattatta
caaagattaaaaacttcttataataaagataaaaaatctcatgtaagagcacttatttta
actcctacaagagaacttgcagctcaagttgcagctagtgttgaaacatatgggaaatat
cttccttttaaatcagcagttatttttggaggagttggaattaaccctcaaattgcactt
ttaagaaaaggtgttgatatagttattgcaactcctggaagacttcttgatttagtttct
caaaattgtttagatttaagaaaaatagaattttttattttagatgaagcagatagaatg
cttgatatgggatttataaacgatattaaaaaagttcttgcaattctcccaaaagagaga
caaaatcttcttttctcagcaactttttcagaagatattaaaaaactagcagatagtcta
ctaaactcacctgttttaatagaagttgcaactgcaaatagtacttctcataaggttgag
caaattgttcaccacgttgatagagaaagaaaaaaagagcttttactttatcttgtaaat
aaaaacaattggaagcaagttttagttttcacaagaacaaaacatggagcaaataaacta
agtgaagcccttgtaaaagatggcattacttcagctgctattcatggtaataaatcacaa
ggtgcaagaacaaaagcattggatgattttaagtcaggaaatgtaagagtattggtagcc
actgatattgcagctcgtggtattgatatagaccaacttccccatgtaataaactttgaa
ttaccaaatatcgcagaagattatgtacatagaattggaagaactggacgtgctggaaat
acaggtgatgcaatttctttagtttgtgtagatgaacatgattacctatttggaatagaa
aaattaattaaacaaaaaattaaaaaagttgaaatattaggttttaaagtagatccaaat
ataaaagctgaaccaattggaaatagaagtaatagaggaaatggttcgaatcaaaaccga
actgcaaaaccaaaagatgcttcaagaaaaccatctggaagaaaaaaagaagaagcagct
ccttcaaaaaataaaaatagcaataatagaaacagtgataataaatacggaagtaaaaat
agtaaccacgctacaaataatacttctaaaaatagaagaactaattctggttttaaaaat
aactag
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