Arcobacter acticola: AACT_2890
Help
Entry
AACT_2890 CDS
T06605
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paco
Arcobacter acticola
Pathway
paco03410
Base excision repair
paco03430
Mismatch repair
paco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AACT_2890 (recJ)
03430 Mismatch repair
AACT_2890 (recJ)
03440 Homologous recombination
AACT_2890 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paco03400
]
AACT_2890 (recJ)
DNA repair and recombination proteins [BR:
paco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AACT_2890 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AACT_2890 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AACT_2890 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QKE29951
UniProt:
A0A6M8ERP9
LinkDB
All DBs
Position
2884211..2885776
Genome browser
AA seq
521 aa
AA seq
DB search
MSKITKNRLFELLSARHLNNPYSKLADIPSPDNFKDIHIATKRIKKAILEKETITIVGDY
DVDGVVSTTIMLDFFNTIGVKVNHIIPNRFEHGYGLSVKIVDLIDDGLVITVDNGISAYE
ASVKLKEKNIDLIITDHHTVGTQIPLALAIINPKQHDCNFEFKDICGAQVAWYLCAAIKK
ELNLDINMTKFLDLLCVAIIADIVPMTALNYTLVKQGLKKIKTSSREAFKRLNEVMSKEF
LVSDDIGFFIAPKLNSAGRMDDASVALSFLLSENAFNANETLSLLDELNNYRKTLQEEIS
RKADSKTDKNDNAVIVWGENWHEGVIGIVASKLSNAHKKPAFIFSIHNGIAKGSARANAN
INLYDVITKAKHLLLGYGGHKNAAGLSLDASNLEEFKTIINEELESSKDDLHIEPITLGE
LDVSSVDLDFISIIEQFEPYGLENHRPIFKISNATLVKYDLLGKDKNHLKLTLNCEGVIF
EALKFNDSNTNIPQNLDLIVSISKNEFRGVVTPQFLIQDIL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaataacaaagaatagactttttgaactactttcagcaagacatttgaataat
ccttattcaaaacttgctgatattccttctcctgataactttaaagatatccacattgca
actaaaagaattaaaaaagccattttagaaaaagaaactattacaattgtaggtgactat
gacgtagatggtgttgtatcaactactattatgctagatttttttaatacaattggcgta
aaagtaaatcatattattccaaatcgttttgaacatggatatggtctttctgtaaaaata
gttgatttaatagatgatggtttagtaataactgttgataatgggatttcagcatatgag
gcatctgtaaaactaaaagaaaaaaatattgatttaatcattacagatcatcacacagta
gggactcaaatacctcttgcacttgctattataaatccaaaacaacatgactgcaacttt
gaatttaaagatatttgcggagcgcaagttgcttggtatttatgtgcagctataaaaaaa
gagttaaacttagatataaatatgactaagtttttagatttactttgtgttgcaataatt
gcagatatagtgccaatgactgctttaaattataccttagtaaaacaaggtttaaaaaaa
atcaaaacctcttcaagggaagcctttaaaaggctaaatgaagttatgtcaaaagagttc
ctagtatcagatgatataggttttttcatagctccaaaacttaatagtgcaggaagaatg
gatgatgctagtgttgctttatcttttttattatctgaaaatgcatttaatgcaaatgaa
actttatctttattagatgaactaaataactatagaaaaaccttacaagaagagatttca
agaaaagctgattcaaaaactgataaaaatgataatgctgttattgtttggggtgaaaat
tggcatgaaggtgttattggaatagttgcttcaaaactatcaaacgcacataaaaaacca
gcttttattttttctattcataatggaattgcaaaaggaagtgcaagagctaatgctaac
atcaatttatatgatgttattacaaaagcaaagcatttgttattaggttatgggggacat
aagaatgcagctggattatcattagatgcttcaaatcttgaagagtttaaaactattata
aatgaagaattagaaagctcaaaagatgatttacatatagaacctattacacttggagaa
cttgatgtttcttctgtagatttagattttatctctataatagaacaatttgaaccatat
ggattagaaaaccatagaccaatttttaaaatatcaaatgcaactttagtaaaatatgat
ttattgggaaaagataaaaatcacttaaaattaacactaaactgtgaaggtgtaatattt
gaagctttaaaatttaatgactcaaataccaatattccgcaaaatttagatttaattgta
tcaataagtaaaaatgagtttagaggagtagttacccctcaatttttaattcaagatatt
ttataa
DBGET
integrated database retrieval system
