Arcobacter acticola: AACT_2896
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Entry
AACT_2896 CDS
T06605
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paco
Arcobacter acticola
Pathway
paco03030
DNA replication
paco03430
Mismatch repair
paco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AACT_2896 (dnaE)
03430 Mismatch repair
AACT_2896 (dnaE)
03440 Homologous recombination
AACT_2896 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paco03032
]
AACT_2896 (dnaE)
03400 DNA repair and recombination proteins [BR:
paco03400
]
AACT_2896 (dnaE)
Enzymes [BR:
paco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AACT_2896 (dnaE)
DNA replication proteins [BR:
paco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AACT_2896 (dnaE)
DNA repair and recombination proteins [BR:
paco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AACT_2896 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Ins134_P3_kin_N
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QKE29957
UniProt:
A0A6M8EZF3
LinkDB
All DBs
Position
2889314..2892859
Genome browser
AA seq
1181 aa
AA seq
DB search
MSQTPQFTHLHLHTEYSLLDGANKIKPLAKKIKKMGMTSVAMTDHGNMFGAIDFYNAMRA
EGIKPIIGMEAYIHNSEDLGDKTTRQRYHLCLYAKNDIGYKNLMFLSSQAYMHGFYYYPR
INKQLLRENSEGLVCSAACLQGEVNWHLNTQNERNVKNGAKGYEGAKAVALEYKEIFEDD
FYLEIMRHGIGDQHFVDDQILRISRETGIKVVATNDTHYLEQKDADAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSPEQIAKLYADIPEAIEATQEIADKCNLEIKLGNPTPPNFKFTR
QKAEDLNLTLPEPELEYSLENDKVLFIHECRIGLEDRLKIVPEERHQEYKDRLEVEIEII
NNMRFPGYMLIVWDFVIVAKQMGIPVGPGRGSAAGSLVAFSLKITDIDPIPYGLLFERFL
NPERISMPDIDMDFCQARRGEIIDYVVQQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YARADAMAKLIPDELGINLTNSYEKEPKIKELCDADPQAARVWEYALALEGLNRNAGTHA
AGVVISNEPLWKKTPLFKPSGLDTLATQYNGKYVEDVDLIKFDFLGLKTLTVIEEANKLI
EQRHGKRVDFITTDVNDKGVYDLIQTGNTIGLFQIESDGMQDLCKRLKPSNFEDIIAVLA
LYRPGPMESGMLDDFIDRKHGRAEINYFYDEFDAPLRPILETTYGVIVYQEQVMQIVQTI
GGFSLGGADLVRRAMGKKIKEEMDRLKGEFAVGGVKKGYQKPHCEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKKYYPSEFMAALLTLEKDNTDKVVKYVDEVKRLGLDLFPPDIN
KSDLVFSAKKIDGEEVVMFGMGAIKGAGDVAIKSILKARDEGGLFTDLADFISRIDGSKV
NKRVIESLTKAGAFDSFGYSRHALLEQIEKIVETVGKAAQAKKMATGSLFGDCDELTKID
IELEHLPEYNAKEILEFEKASLGFYVSGHPLDQYREQLEKVNYTLSSQIDELADGSQAIF
VGKIENITEKISKKGNKFGIATIMDLHGNIELMLFEDRLKELKESYNLEEPIAFKVRISK
DDNFTRMNILKIETILDAQKEKVKTKQKEVQEPPLTIALPFTNDESTMYKLFDIVANNQG
KRELKLLIKSKLADLELETGFKVTSQVENLIQQIEGVYVVA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaccacaatttacccatctacacttacatacagaatattcactacttgat
ggtgcaaataaaattaaacccctagcaaaaaaaataaaaaaaatgggaatgactagcgtt
gctatgactgaccatggaaatatgtttggagctattgatttttataatgcaatgagagca
gaaggtataaaaccaattattggaatggaagcatatattcataatagtgaagacctagga
gataaaacaactagacaaagataccacttatgtttatatgcaaaaaatgatataggttat
aaaaacttaatgtttttaagttcacaagcttatatgcatggattttattattaccctcga
attaataaacaacttttaagagaaaattctgaaggcctagtttgtagtgctgcctgttta
caaggtgaagttaactggcatttaaacacacaaaatgaaagaaacgtaaaaaatggtgca
aaaggatatgagggtgcaaaagctgtcgcacttgaatataaagaaatctttgaagatgat
ttttatttagaaataatgagacatggaattggtgaccagcattttgttgatgatcaaatc
ttacgaatctcaagagaaacaggaataaaagtagttgctacaaatgatactcactattta
gaacaaaaagatgctgacgcacatgaggcttttatgtgtattgcgatgaataaactttat
gatgatccaaatagattaagacatagtgttcatgaattttacttaaaatcaccagaacaa
attgcaaaattatatgcagatattcctgaagccattgaagcaactcaagagattgctgat
aaatgtaatttagaaataaaactaggaaaccctactcctcccaattttaaatttacaaga
caaaaagctgaagatttaaatttaacactaccagagccagagcttgagtattctcttgaa
aatgataaagttttatttattcacgaatgtcgaataggattagaagatagattaaaaatt
gttccagaagaaagacatcaagaatataaagatagacttgaggttgaaattgaaattatt
aataatatgcgattcccaggatatatgcttattgtttgggatttcgtaatagttgctaaa
caaatgggaattccagtgggtcctggacgaggatcagcggctggaagtttagttgccttt
tctttaaagatcacagatattgacccaattccttacggtttactttttgagagatttcta
aatccagaaagaatatcaatgcccgatattgatatggacttttgccaagcaagacgtggg
gaaattattgattatgttgttcaacaatatggtcgagccaacgttgctcaaattattacc
tttggtaaactcttagcaaaaggggtaattagagacgttgcaagagttcttgatatgcca
tatgcaagagcagatgctatggcaaaactaattcctgatgaattaggaataaatcttaca
aactcatatgaaaaagaaccaaaaataaaagaactttgtgatgcagacccacaagcagca
agagtttgggaatatgctttagcgcttgaaggattaaatagaaatgcaggaacacacgca
gcaggtgttgttatttcaaatgagcctttatggaaaaaaacacccctttttaaaccctca
ggacttgatacgctagcaactcaatataatggtaaatacgttgaggatgtggatttaatt
aaattcgacttcttgggtcttaagaccctaacagttattgaagaagcaaataaactaata
gaacaacgtcatggaaaaagagttgatttcattaccacagatgtaaatgataaaggtgtc
tatgaccttattcaaactggaaatacaattggactattccaaatagagtcagatggtatg
caagatttatgtaaaagattgaaaccttcaaattttgaggatattatcgccgttcttgca
ctttatagaccaggtccaatggaatcaggaatgcttgatgactttattgatagaaaacac
ggtcgagcagagattaactacttctacgatgaatttgatgcgcctttaagaccaattctt
gaaacaacttatggagttatcgtttaccaagagcaagtaatgcaaatcgtacagactatc
ggtggatttagccttggaggtgccgatttagttagacgagctatgggtaaaaagattaaa
gaagagatggatagattaaaaggagaattcgcagttggtggagtaaaaaaaggttatcaa
aaacctcactgtgaagaacttttcgatcttatcgtaaaatttgctggatatggatttaat
aaatctcactcagcagcttatgcacttgtaacattttatacttcgtatttaaaaaaatat
tatccatcagaatttatggcagctttacttacacttgagaaagataacacagataaagtt
gttaaatatgtggatgaagtaaaaagactaggacttgatttatttccacctgatattaat
aaatcagatttagtattctcagctaaaaaaattgatggtgaagaagttgtaatgtttgga
atgggtgctattaaaggtgctggagatgttgcaattaaatctattttaaaagcaagagat
gaaggtggattatttactgatttagcagattttatttcaagaattgatggaagtaaagta
aataaaagagtaatagaatcacttacgaaagcaggagcctttgatagttttggttattca
cgtcacgcattacttgaacaaatagaaaagattgttgaaacagtaggaaaagcagcacag
gcaaaaaaaatggctacaggttctttatttggagattgtgatgaacttacaaaaatagat
atagagttagagcatcttcctgaatataatgcaaaagaaatattagagtttgaaaaagct
tctttaggattttatgtatctggtcatccacttgatcaatatagagaacaactagaaaaa
gtaaattatacactttcttctcaaattgatgaactagcagatggtagtcaagcaattttt
gttgggaaaatagaaaatattactgaaaaaatatctaaaaaaggtaataagtttggaatt
gcaacaatcatggatttacatggaaatattgagcttatgctttttgaagatagattaaaa
gagttaaaagagagctataacttagaagagccaattgcctttaaagtaagaatttcaaaa
gatgataacttcacaagaatgaatatcttaaaaatagaaacaatcttagatgcacaaaaa
gaaaaagtaaaaaccaaacaaaaagaagtccaagagccaccattaacaatagcacttcct
tttacaaatgatgaaagcactatgtataaactatttgatatagttgcaaataatcaaggg
aaaagagagttaaaacttttgataaaatcaaaacttgcagacttagagttagaaactggt
tttaaagttacatctcaagttgaaaatttaattcaacaaatagaaggagtatatgtagta
gcatga
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