Paraburkholderia acidiphila: FAZ97_00365
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Entry
FAZ97_00365 CDS
T07262
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp00300
Lysine biosynthesis
pacp00470
D-Amino acid metabolism
pacp01100
Metabolic pathways
pacp01110
Biosynthesis of secondary metabolites
pacp01120
Microbial metabolism in diverse environments
pacp01230
Biosynthesis of amino acids
Module
pacp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FAZ97_00365 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FAZ97_00365 (dapF)
Enzymes [BR:
pacp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FAZ97_00365 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CitF
Motif
Other DBs
NCBI-ProteinID:
QGZ53475
UniProt:
A0A7Z2G1H2
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All DBs
Position
1:complement(80041..80907)
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AA seq
288 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYSQDLALTPERVRALADRHFGIGADQLLIVENPTVEGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDRKLTDSNRVRVQVQKGTITLVVQENGEVVVDM
DRPDFEPERVPFNANGLEGRREGNDTLWPLDVNGARRWVSVVSMGNPHAVQVVDDVEAYP
VKAEGAVIETHARFPNKVNAGFMQIVSRNEVKLRVFERGAGETLACGTGACAAVAAGIRR
GLLDTPVKVHTHGGMLTIAWDGARDESAALTMAGPAATVFEGEIELAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tacagccaggacctcgcgctcacgcccgagcgcgtgcgtgcgctcgccgaccgccacttc
ggcatcggcgcggaccagttgctgatcgttgagaatccgaccgtggaaggcgtggacttc
cgctatcgcatcttcaattgcgacggcggcgaggtcgagcactgcgggaacggcgcgcgc
tgcttcgtgaaattcgtgcgcgaccgcaagctcaccgattcgaaccgcgtgcgcgtgcag
gtgcagaagggcacgatcacgctcgtcgtgcaggaaaacggtgaagtcgtcgtcgacatg
gaccgtcccgattttgaacccgagcgcgtgccgttcaacgcgaacggcctcgaaggccgc
cgcgaaggcaacgacacgctctggccgctcgatgtgaatggcgcccggcgctgggtgtcg
gtcgtctcgatgggcaacccgcacgcggtgcaggtagtcgacgacgtggaagcataccca
gtgaaggcggaaggcgcggtgatcgaaacgcacgcgcgcttcccgaacaaggtgaatgcc
gggttcatgcagatcgtttcgcgcaacgaagtgaagctgcgcgtattcgagcgcggcgcc
ggtgaaacgctcgcgtgcggcacgggcgcgtgcgcggccgtggcggcgggcattcgccgc
gggttgctcgacacgcccgtgaaggtgcatacgcatggcggcatgctgaccatcgcctgg
gacggcgcgcgcgacgaatccgccgcgctcaccatggcgggcccggccgccaccgtgttc
gaaggcgagatcgagctggccgactag
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